ggKbase home page

SCN18_25_8_15_R2_B_scaffold_26521_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 3..221

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RZM2_LEAB4 similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 71.0
  • Bit_score: 114
  • Evalue 4.30e-23
TonB-dependent receptor plug {ECO:0000313|EMBL:KGE14781.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 72.0
  • Bit_score: 119
  • Evalue 1.10e-24
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 72.0
  • Bit_score: 114
  • Evalue 9.40e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 219
GCACCATTCAATACCGTTTGGCCGAAGTCTGAATGGTTTACCACACCTGCTCAACTTGTACACGATGCAGGAGTAAATTACCGGTTCCCTAACAGGAAACTTATTGTAAGCATTGATGCTAAAAACATCTTTAACTCTGAAGTGTACGACAATTTTGGCGTACAAAAACCAGGCAGAGGTTTCTATGGAAAAATAACTTATACAATTGGCAAATTTTAA
PROTEIN sequence
Length: 73
APFNTVWPKSEWFTTPAQLVHDAGVNYRFPNRKLIVSIDAKNIFNSEVYDNFGVQKPGRGFYGKITYTIGKF*