ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1064_23

Organism: SCN18_25_8_15_R2_B_Burkholderiales_69_21

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(22150..23067)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZW1_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 305.0
  • Bit_score: 579
  • Evalue 1.50e-162
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 305.0
  • Bit_score: 579
  • Evalue 4.40e-163
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO23557.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 305.0
  • Bit_score: 579
  • Evalue 2.20e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGATGCTCTCCCGCAACCTGCTGGCCTTCATCGCGGTGGCCGAGGAACTGCATTTCGGCAAGGCCGCGCAGCGGCTGCACATCAGCCAGCCGCCGCTGAGCCAGCAGATCCGCCAGTTCGAGGAAGAGGTCGGGGCGCCGCTGCTGGTGCGCACCACGCGCTCGGTGCAGCTCACCCCCGCGGGCCGCCTGATGCTGGAGCGCGCCCACCTGCTGCTGGCCGAGGCGGGCGCCGCGCTGCACTCCGTCCGGCGCCATGCCGTGGGCGACGAGGGCGTGCTCACGCTGGGGTTCACCCACAGCACGGTCTACCGCGTGCTGCCCAGGGTGCTGCACGCCTTTCGGCAGGCATGCCCCGACGTGGTGCTGGAGCTACGGCAGCTCACGTCCGACCTGCTGGTGCAGGAGGTGCGCAGCGGCCGCCTGGACGTGGCGATGCTGCGGTTTTCCTCCTCCATGGAAAGCGCCGACTTGATGTCGCGGGTGGTCACCCACGACCCCATGGTGCTGGTCCTGCCGCTGGGGCATCCGCTCGCGGCGCATCGGCGCGTGCCGGTCCGGCTCCTGCAGGGGCTGCCCTGGGTGGGCTATGAGATACAGGGCGCGCGCTATTTCCATGAACTGGAGGAAAAGGTGCTTGCCGGCGCGCGGGTGCGCCCCAGCGTGCAGCACCGCAGCCTGCTGCCGACCCTGCTTGCCCTGGTGGAGGCCGGCATGGGCGCGGCGCTCGCCCCCGCGTCCGCCGTGCAAGGGGTGGCGGGGCGCATCGAGTGGCGGGAACTGGCGCTGCCCGAGGGCTGCGCGCCCCTGGATGCGGTGCTTTCCTGCGTCTGGGCTGCGGACAACTGCAATCCGGTGGTGCAGCGGTTCCTGGACTGCCTGTCCGATGCGGTGCCGCAGGACGAAAGGGCAGGTTAG
PROTEIN sequence
Length: 306
MMLSRNLLAFIAVAEELHFGKAAQRLHISQPPLSQQIRQFEEEVGAPLLVRTTRSVQLTPAGRLMLERAHLLLAEAGAALHSVRRHAVGDEGVLTLGFTHSTVYRVLPRVLHAFRQACPDVVLELRQLTSDLLVQEVRSGRLDVAMLRFSSSMESADLMSRVVTHDPMVLVLPLGHPLAAHRRVPVRLLQGLPWVGYEIQGARYFHELEEKVLAGARVRPSVQHRSLLPTLLALVEAGMGAALAPASAVQGVAGRIEWRELALPEGCAPLDAVLSCVWAADNCNPVVQRFLDCLSDAVPQDERAG*