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SCN18_25_8_15_R4_B_scaffold_71_106

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(98826..99329)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZGA1_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 165.0
  • Bit_score: 271
  • Evalue 4.90e-70
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 167.0
  • Bit_score: 274
  • Evalue 6.30e-71
transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 165.0
  • Bit_score: 266
  • Evalue 4.50e-69

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGGGCCGCTGGCGTCCCCCTGCCGAGAAAAGCACGGCGCTGATCACCCGCGCCGGCCATGCCCGCCTGAAGGCGGAACTGGACGAACTGTGGCGCGTGCGCCGCCCGGAGGTGGTCAAAGCGCTGGCCGCCGCCGCCGCCGAGGGCGACCGTTCGGAAAACGCCGAATACACCTACCGCAAGAAGCAGCTGGGCGAGATCGACCGCCGCGTGCGCTATCTCAGCAAGCGGCTGGAAGCGCTGAAGGTGGTGGACGCCGCGCCCGCCGACCGCGAGGCGGTGTTTTTCGGCGCCGAGGTGGAACTGGAGAACATCGCCAGCGGCGCGTGCGTCTGCTACCGCATCGTCGGCCCGGACGAAACCGACGCCGCGCGCGGCTGGATCAGCATCGACGCCCCGCTGGCGCGCGCGCTGCTGAAGAAGCGGATCGACGACGAGGTGCAGGTGCAGCTGCCCGGCGGCCTGGTGCACTACGTGATCGTGGACGTGCGCTACCCAGGCTGA
PROTEIN sequence
Length: 168
MGRWRPPAEKSTALITRAGHARLKAELDELWRVRRPEVVKALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYLSKRLEALKVVDAAPADREAVFFGAEVELENIASGACVCYRIVGPDETDAARGWISIDAPLARALLKKRIDDEVQVQLPGGLVHYVIVDVRYPG*