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SCN18_25_8_15_R4_B_scaffold_71_133

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 126356..126706

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM78 RepID=J3IBS3_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 115.0
  • Bit_score: 164
  • Evalue 5.90e-38
RNA signal recognition particle 4.5S RNA {ECO:0000313|EMBL:KFX68222.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 115.0
  • Bit_score: 166
  • Evalue 2.20e-38
Protein of unknown function DUF1428 similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 115.0
  • Bit_score: 160
  • Evalue 1.80e-37

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Taxonomy

Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGTACGTGGACGGATTCCTGCTGGCGGTGCCCACCGCCAACCGCGAGGCTTACCGCCTGCACGCCGAGGCCGTGGCGCCGGTCTTTCGCGAACACGGCGCGCTGAGTCTGGTCGAGGCCTGGGGCGACGACGTGCCCGAAGGCAAACTCAATTCGATGCGCTCGGCGGTGCTGTTGAAACCTGATGAGACCGTGGTCTTCGCCTGGATCACCTGGCCCGACAAGGCCACGCGCGATGCCGGCATGGCGAAAGTCGCCGCCGACCCGCGGGCCCGCGGCAACATGGCGGACATGCCCTTCGACGCGAAACGCATGATCTTCGGTGGCTTCGAGGTGATCGTCGATGCCTGA
PROTEIN sequence
Length: 117
MYVDGFLLAVPTANREAYRLHAEAVAPVFREHGALSLVEAWGDDVPEGKLNSMRSAVLLKPDETVVFAWITWPDKATRDAGMAKVAADPRARGNMADMPFDAKRMIFGGFEVIVDA*