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SCN18_25_8_15_R4_B_scaffold_71_201

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 194501..195184

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 211.0
  • Bit_score: 336
  • Evalue 2.40e-89
ribonuclease III n=1 Tax=Xanthomonas sacchari RepID=UPI000262B001 similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 214.0
  • Bit_score: 315
  • Evalue 4.00e-83
ribonuclease 3 similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 214.0
  • Bit_score: 312
  • Evalue 9.70e-83

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
GTGGTGCAGGTGCCAACTGAACCAGCGCGGGTGTTCGCGGGGCATGCCTTCGCGGCCCCGGAGCTGCTGGCGCAGGCGCTGACCCACCGCAGCGTGGGCAGCCCCAACAACGAGCGGCTCGAATTCCTGGGCGATGCGCTGGTCAACCAGATCATCGCCGAGGCGCTGTACCGGCACTGGCCGAAGGCCGACGAAGGCGCGCTGACCCGCGCCCGCGCCGAACTGGTGCGCGAATCCGCGCTGGCCGGCATCGCCCGTACGCTCGGCCTTGGTGCGCATCTGCGGCTGGGGCCGGGAGAAATGAAGACCGGTGGCCATCGCCGCGATTCCATCCTCGCGGATGCGCTGGAGGCGCTGGTGGCGGCGATCTACCTGGACGCCGGCTTCGAGGCCTGCCGCGCGGTGGTGCTGCCGTGGTTCGCGCCGCTGATCGCCGCCCTGCCGCCGCCGAACAGGGTCGGCAAGGACGCCAAGACCCGCCTGCAGGAATGGCTGCAGGCACGCCAGCGCCCGCTGCCGGCCTATGCGCTGCTGCACGAGGGCGGCGAGGACCACGCGCGGGTGTTCCGGGTCAGCTGCACCCTGGCCGTGCCCGCGCTGCGCACCGAAGGCGAGGGCAGCTCGCGGCGCGCGGCGGAACAGCAGGCGGCCGAGGCCGCGCTCAAGGGCATCGAACAGGCATGA
PROTEIN sequence
Length: 228
VVQVPTEPARVFAGHAFAAPELLAQALTHRSVGSPNNERLEFLGDALVNQIIAEALYRHWPKADEGALTRARAELVRESALAGIARTLGLGAHLRLGPGEMKTGGHRRDSILADALEALVAAIYLDAGFEACRAVVLPWFAPLIAALPPPNRVGKDAKTRLQEWLQARQRPLPAYALLHEGGEDHARVFRVSCTLAVPALRTEGEGSSRRAAEQQAAEAALKGIEQA*