ggKbase home page

SCN18_25_8_15_R4_B_scaffold_71_294

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(299984..301258)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B0D4 similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 426.0
  • Bit_score: 504
  • Evalue 6.70e-140
Membrane protein {ECO:0000313|EMBL:AHY59600.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 419.0
  • Bit_score: 488
  • Evalue 7.00e-135
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 413.0
  • Bit_score: 483
  • Evalue 3.50e-134

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGCCGAGGGCTGAGCACGCGCGCGCCGCGGCGCGCTGGGTGCTGGCCCCCGTGCTGGCGCTGCTGGCCGCGGTGGCCATGGGCGCCACGCCCGCCCCGTCATCCTCCCCATCATCCGCGCCGCCATCGGCATCCACATCGCCCGCACCGCCTGCCGATGCACCGCCGGCGGCGCCGCGGATCGGGGTGGTGACAATGGGCCCGGGCGAGGTGTTCTGGGAACGCTTCGGGCACGACGCCATCGTGGTGGAAGATCCGCGCACCGGCGCGCGTACCAACTACAACTTCGGCTTCTTCGACCTCGACGAGCCCGGCTTCCTCGGCCGCTTCGTCAAGGGCGACATGCGCTACCGGCTGGTGGCGCTGCCGCTGGACGAGGACATGGCCTATTACCGCGCGGTCGGGCGCGGCGCGCGGGTGCAGTGGCTGGACCTGGAGCCGGCGCAGGCGCGGGCGCTGGCAGCGGCGCTGGCCGAAAACGCACGCCCCGAGAACGCGCGCTACCGCTACGACTACTTCACCGACAACTGCGCCACCCGTGTGCGCGACGCGCTCGACCGCGCGCTCGGCGGCCACCTGCGCAAGCAGCTGGAAGGCCGCTCCAGCGGCGACACCTACCGCAGCGAGGCGTTGCGGCTGGCCTCGCCGGAGGCGTGGATGTGGCTGGCCTTCGACATCGGCCTGGGGCCCTACGCCGACCGCCCGCTGAGCCGCTGGCAGGAGGATTTCCTGCCGCGCCGGCTGGCCGACGACCTGCGCCGGGTCAGCGGCACCCACGGCCGTCCGCTGGTGGCCGCGGAAGGGGAACTGCTGCCGCAGCGGCTGCCGCCGGAGCCGGCCGAGCAGGAACCGGCGCTGTGGCCCTGGCTGCTGGCCGGGGTGCTGGCCGCGGCCGGCATCCTGTGGCTGCGCACGCCCCGGCCGCGGCTGCTGGCCGGACTGGCGCTGGGCTTCTGGCTGCTGTGCGGCCTGCTCGGGCTGGTGCTGGCGCTGGGCTGGGCGTTCACCGACCACCAGGCGATGTGGGCCAACCGCAACCTGCTGCTGTTCAACCCGCTGTGCCTGCTGCTGGTGCCGGGCGCGGTCGCCCTGCTGCGTAAGCGTGTGCCCTCGCCGCGCTTTTTCGCCCTGCTGGTGGCGGTGGCGGTGCTGGCCCTGCTGGCCTGCCTGCCGCTGTGGCTGCAGCTGTATCCGCAGCGCAACGGCCACTGGATCGCCCTGCTGCTGCCGATCCACGCGGCGCTGGCGCGCGCCTGGCGCAGGCCGGCGGCTTGA
PROTEIN sequence
Length: 425
MPRAEHARAAARWVLAPVLALLAAVAMGATPAPSSSPSSAPPSASTSPAPPADAPPAAPRIGVVTMGPGEVFWERFGHDAIVVEDPRTGARTNYNFGFFDLDEPGFLGRFVKGDMRYRLVALPLDEDMAYYRAVGRGARVQWLDLEPAQARALAAALAENARPENARYRYDYFTDNCATRVRDALDRALGGHLRKQLEGRSSGDTYRSEALRLASPEAWMWLAFDIGLGPYADRPLSRWQEDFLPRRLADDLRRVSGTHGRPLVAAEGELLPQRLPPEPAEQEPALWPWLLAGVLAAAGILWLRTPRPRLLAGLALGFWLLCGLLGLVLALGWAFTDHQAMWANRNLLLFNPLCLLLVPGAVALLRKRVPSPRFFALLVAVAVLALLACLPLWLQLYPQRNGHWIALLLPIHAALARAWRRPAA*