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SCN18_25_8_15_R4_B_scaffold_71_318

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 323009..323218

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspC {ECO:0000313|EMBL:KGQ20456.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 69.0
  • Bit_score: 136
  • Evalue 8.40e-30
Cold-shock DNA-binding domain protein id=2560026 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 69.0
  • Bit_score: 131
  • Evalue 3.30e-28
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 69.0
  • Bit_score: 130
  • Evalue 1.60e-28

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Taxonomy

CN-SCN_Arenimonas_307x → Arenimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGTCGGATCGTCAGACCGGTACCGTCAAGTGGTTCAACGATGCCAAGGGCTTCGGCTTCATCACCCCGGAATCCGGCCCGGACGTCTTCGTCCACTTCCGCTCGATCGTGGGCACCGGCTTCAAGTCCCTGCAGGAAGGCCAGAAGGTCTCCTTCAAGGTCGTGCAGGGCCAGAAGGGCCTGCAGGCCGACGAAGTGCAGGCGCTGTAA
PROTEIN sequence
Length: 70
MSDRQTGTVKWFNDAKGFGFITPESGPDVFVHFRSIVGTGFKSLQEGQKVSFKVVQGQKGLQADEVQAL*