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SCN18_25_8_15_R4_B_scaffold_71_421

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 442604..443179

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WRP9_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 191.0
  • Bit_score: 231
  • Evalue 4.90e-58
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 161.0
  • Bit_score: 253
  • Evalue 2.20e-64
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 191.0
  • Bit_score: 231
  • Evalue 1.40e-58

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
TTGATCCACCGCAGCGACGCCCGTGCGGCGGCGTCGCCGGATGCGACGATCCCGATGAGCGCACCGTCGGCCGGTCAGCGGATGATCACCGTGGGCCGACTGCACGGTGCGTTCGGCGTGTGTGGCGAGGTCAAGCTGGAAAGCTACACCGAACCGGCCCGCGCCATTGCCCGCTATCAGCCGTGGACCCTGCGCGATGCGCGCGGCGGCGAGCGTGTGTGCGAGGGTGCGAAGGTGCGCGCCGGCGGCAAAGGCCTGATCGCTTCCCTGCCGGGGATCGCCGACCGCGACGCCGCCGACGCCCTGCGCGGAACCGAGGTGCTGGTGCCGCGCAGCGCACTGCCGCCGCCGGCTCCCGGCGAGTACTACTGGGTGGACCTGGAAGGCCTGCGCGTGGTCAATGTCGAAGGCGTGGACTTCGGGCACGTGGCCTACCTGTTCGACAACGGCGCCAACCACGTGCTGGTGGCGCAGGGTGAACGCGAGCGCATGATCCCGTTCGTGCAACCGGATTTCATCCGCAGCGTCGATTTCGCCTCCGGCCTGGTGACGGTGGACTGGGACGCGGATTTCTAG
PROTEIN sequence
Length: 192
LIHRSDARAAASPDATIPMSAPSAGQRMITVGRLHGAFGVCGEVKLESYTEPARAIARYQPWTLRDARGGERVCEGAKVRAGGKGLIASLPGIADRDAADALRGTEVLVPRSALPPPAPGEYYWVDLEGLRVVNVEGVDFGHVAYLFDNGANHVLVAQGERERMIPFVQPDFIRSVDFASGLVTVDWDADF*