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SCN18_25_8_15_R4_B_scaffold_273_28

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 14433..14804

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L17 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URX6_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 122.0
  • Bit_score: 222
  • Evalue 1.50e-55
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 122.0
  • Bit_score: 225
  • Evalue 2.50e-56
rplQ; 50S ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 122.0
  • Bit_score: 222
  • Evalue 4.20e-56

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGCGCCACCAGAAAGCCGGCCGCAAGTTCAATCGCACCAGCGCCCATCGCCAGGTGATGTTCTCGAACATGGCGGCGTCGCTGTTCAAGCACGAAATCATCCGTACCACCCTGCCCAAGGCCAAGGAACTGCGTCGCGTCGCCGAGCCGCTGATCACCCTGGCCAAGACCGATGGTGTGGCCAACCGCCGCCTGGCGTTCTCGCGCCTGCGCGACAAGGAAGCGGTGGGCACCCTGTTCACCGTGCTCGGCCCGCGCTATGCGCAGCGCCCGGGCGGCTACCTGCGCATCCTCAAGTGCGGCTTCCGCGCCGGCGACAACGCGCCGATGGCCTACGTCGAGCTGGTGGATCGCCCGCAGGCCGCCGAGTAA
PROTEIN sequence
Length: 124
MRHQKAGRKFNRTSAHRQVMFSNMAASLFKHEIIRTTLPKAKELRRVAEPLITLAKTDGVANRRLAFSRLRDKEAVGTLFTVLGPRYAQRPGGYLRILKCGFRAGDNAPMAYVELVDRPQAAE*