ggKbase home page

SCN18_25_8_15_R4_B_scaffold_1475_9

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 8678..9826

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 1 n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RLG3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 360.0
  • Bit_score: 455
  • Evalue 3.20e-125
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 360.0
  • Bit_score: 455
  • Evalue 4.50e-125
prfA; peptide chain release factor RF-1 similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 355.0
  • Bit_score: 452
  • Evalue 7.70e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
GTGGCGTGTCTCGATGGATCCCGGGTCTGCGCGGTGTTGCCGCTTGCCCCGGATGACAGGTCTTACTGCATGATTCCCGCTGCCAAACTCGACCGGCTATCGAACCGCTTTGCGGAAATCGAAGCGCGTCTTGCGGCCGGTGCGGGCGGTACGGATTTCGTCAAACTGTCGAAGGAGCATGCCGAGCTCGCCCCGGTGATCGACGCGGTAAACGCTTATCGCGAGGTCGAGAAGCAGTTGCACGAAACCGATGCGCTGATCGGCGATCCGGCATCGGACGCAGAGATGCGCGCCTTGGCGGAAGAAGAACGCGCAGAGTTAAAGGCACGCTTTGCGGACCTTGAACATCAATTGCGGATCGAATTGCTGCCGAAAGATGCGGCGGATTCGTCCTCCGCCATCGTGGAAATCCGTGCCGGCACGGGTGGAGATGAGGCCGCCCTGTTCGCTGGCGATCTGGTACGCATGTACACCCGCTATGCGCAATTGCAGGGCTGGCGTGCCGATCTGATGAGCATTCATGAAAGCGATCTGGGTGGTGTGCGCGAAGCCATACTGGAGGTGGCGGGAACGGGCGCCTTTGCCAAACTCAAATTCGAATCCGGCGGCCACCGTGTGCAGCGCGTGCCGGTGACCGAAGGCGGCGGACGCATTCATACCTCGGCGGCCACGGTTGCGGTGCTGCCCGAGCCGGAGGATGTCGATGTGCAGATCGACGAGAAGGATTTGCGCATCGATGTGTTTAGGGCCAGCGGCGCCGGCGGCCAGCACGTGAACAAGACCGAAAGTGCTGTGCGCATCACGCACCTTCCAACCGGGATCGCGGTGGCGCAGCAGACCGAGAAATCCCAGCACAAGAACAAGGCCCAGGCGATGAAGCTTCTGAAGGCGCGCCTGTTTGAAGCCGAACGCAACCGGGTGGACAGTGCGCGCGCCGCCGAACGCAAAGGTCTGGTCGGTTCGGGCGACCGGTCGGAGCGCATCCGCACCTACAATTTTCCGCAAGGCCGCGTCACCGATCATCGGATCAATCTGACGCTCTATAAGCTCGACCGCATTCTGTCCGGCGAAGAACTGGACGAAGTGATCGAAGCCCTGATCACCGAAGATCAGGCCAGCCGCCTGGCTGCGCTGGATTCAGGGGTGTGA
PROTEIN sequence
Length: 383
VACLDGSRVCAVLPLAPDDRSYCMIPAAKLDRLSNRFAEIEARLAAGAGGTDFVKLSKEHAELAPVIDAVNAYREVEKQLHETDALIGDPASDAEMRALAEEERAELKARFADLEHQLRIELLPKDAADSSSAIVEIRAGTGGDEAALFAGDLVRMYTRYAQLQGWRADLMSIHESDLGGVREAILEVAGTGAFAKLKFESGGHRVQRVPVTEGGGRIHTSAATVAVLPEPEDVDVQIDEKDLRIDVFRASGAGGQHVNKTESAVRITHLPTGIAVAQQTEKSQHKNKAQAMKLLKARLFEAERNRVDSARAAERKGLVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILSGEELDEVIEALITEDQASRLAALDSGV*