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SCN18_25_8_15_R4_B_scaffold_1268_4

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(5751..6986)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00037AD542 similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 410.0
  • Bit_score: 407
  • Evalue 8.30e-111
transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 403.0
  • Bit_score: 405
  • Evalue 1.50e-110
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACG79617.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 403.0
  • Bit_score: 405
  • Evalue 7.50e-110

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
GTGACGAGAACGGAGCGGGCGCAACCGGCATCGACCGCGCGCTACAACCGGAAGAAAGAGGCGATCATCGCCGCCGCCGCGGGCATTCTGAACCGCCACGGCGTGCGCGGGATGACGCTTGCCGATGTCGCGGCCGGTGTCGGCCTGATCACTACCAGCGTCACCTATTACTTCAAGAAGAAGGAAGATCTGGCGCTCGCCTGTTATCTGCGCGCGATCGCGCGTTATGACGTGCTGATTTCGGACGCGTTGCAGAAGCCCGATCCACAAGCGCAGCTTGCCGCACTGCTGGAAAATTTCTTCCAGCTCGACCGCCGCATCCGGGAAGGGAAAGAGCCGCCGCTGGTCACGTTCAGCGATTTGCGCTCGCTCCACGAACCGCATCTGTCGATGGTGAATACGGCCTACAGCCAGATGTTCCGCAAAGTTCGTAGCCTGTTTCAGCACCCCGGTCAGGATCAGAAGGCGCGCCGCATGGCGACCGCGCGCGCTCATGTGCTGATGGAGCAGCTTTTTCTGACCGCCATCTGGCTGCCACGGTTCGAGGTGGAGGATTACCCCCGCGTCTGCGCGCGCATGCTGGACATCCTGCACCACGGCATTGCCGGCGAACAGACAGCATGGGCGCCGGAACCATTGCCCGAAATCGACCGCATCACCCATGGCGAGCCGGAAAGCGCACGCGAAACCTTTCTGGTTTCCGCCACGCGCCTGATCAATCAACTGGGCTATCGCGGCGCATCGGTGGAGAAGATTTCCGAACAGCTCAATGTCACCAAGGGCTCGTTCTATCATCACAACGACGCGAAGGACGATCTTGTGGTGTCGTGCTTCCTGCGCAGCTTCGCCATCGTGCGGCAGGCGCAGACCCTTGCCATGGCAATGGGCGGTACCCTGTGCGCACAGATCGCGGCGGCAGCCGCCAGCCTTGCCGAATTCCAGGTCAGTGAACGGGGGCCGCTTCTGCGCACCTCGTCGCTTAGCGCGCTGCCGGAGCCGATACGCTATGACATGATGGATCAGGCCGCGCGGGTGACGGGCCGCTTTTCCGGCATGATCTCGGACGGCGTCGCCGAAGGATCGCTGCGTCCGGTGGACCCGCTGATCGCAGCCCAGATGCTGAACGCCAGCTTGAATGCCTCATCTGCGGCCCTGCTGGTGATCCCGAAGATCGAACCGGGCGAGATCGCCACGTTCTACATCAAACCCGTTCTGCTGGGCATGTTCGCGGCCTGA
PROTEIN sequence
Length: 412
VTRTERAQPASTARYNRKKEAIIAAAAGILNRHGVRGMTLADVAAGVGLITTSVTYYFKKKEDLALACYLRAIARYDVLISDALQKPDPQAQLAALLENFFQLDRRIREGKEPPLVTFSDLRSLHEPHLSMVNTAYSQMFRKVRSLFQHPGQDQKARRMATARAHVLMEQLFLTAIWLPRFEVEDYPRVCARMLDILHHGIAGEQTAWAPEPLPEIDRITHGEPESARETFLVSATRLINQLGYRGASVEKISEQLNVTKGSFYHHNDAKDDLVVSCFLRSFAIVRQAQTLAMAMGGTLCAQIAAAAASLAEFQVSERGPLLRTSSLSALPEPIRYDMMDQAARVTGRFSGMISDGVAEGSLRPVDPLIAAQMLNASLNASSAALLVIPKIEPGEIATFYIKPVLLGMFAA*