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SCN18_25_8_15_R4_B_scaffold_1370_9

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(9895..11025)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IP29_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 374.0
  • Bit_score: 465
  • Evalue 3.10e-128
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:KIH84117.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 376.0
  • Bit_score: 514
  • Evalue 8.10e-143
mannose-1-phosphate guanyltransferase similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 376.0
  • Bit_score: 466
  • Evalue 5.10e-129

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGCGCTTTTCGTTGCTGCGCGTGCGCGCAATCCTGATCAAGGAATACATCCAGATGCGGCGCGACCGGCTAACGCTTGCGATGATCGTGGGCGTTCCGGTGATGCAGCTCTTTCTGTTCGGCTTTGCGATCAATCTCGATCCCAAACATCTGCCCACCGCGCTGACCATCGAAGATCCCGGCGCATTTTCGGATTCCATCACGGCGGGGCTGATGAATTCGGACTATTTCCGCGTCGTGCGCCAGACACGTTCCCCCGCGGAAGCGCGCCGCCTGCTTGACCGCGGCACGGTTTCATTCGTGGTGAACATTCCGGCCAATTTCTCCCGCGATCTGGTGCGCGGCGCATCCCCCACGATCCTTCTGGAAGCCGATGCCACCGACCCGGCATCGGGCTCGCGTGCGGTGGGCGCATTCCAAGGCCTGATCGAAAATGCGTTGCGCGATGATCTGAAAGGGCCACTGGCCGCGCGCGCAGCCGCCAGTCCCGCTTTCCAAGTTGCCGTTCACGAACGCTACAATCCCGAATCCAACACGCAGTACAATGTCGTGCCTGGTCTTCTGGGCGTGATCCTGACCATGACACTGGTCCTGATGACATCGATGGCGGTGACACGCGAGCGCGAACGCGGCACGTACGAAAATCTTCTGGCGATGCCGGTGCGGCCCCTGGAAATCATGACCGGCAAGATCGCGCCTTATGTGATCGTGGGCCTGATCCAGAGCGCCCTGATTCTGGTGGCCACGAAAATCGTTTTCGCGGTGCCGATGCTTGGCTCGCTCACCCTGCTTAGCGGCGCCCTTCTACTTTTCATCATCGCCAACCTGGCCGTGGGCTACACCTTCTCCACCGTGGCCAAAAGCCAGCTTCAGGCGATGCAGATGATGGTATTTTTCCTGTTGCCGTCGATACTGCTGTCAGGCTTTGTTTTCCCCTTCCGGGGCATGCCCGGATGGGCACAGGCGCTGGGCGAAATCATGCCCATCACGCATTTCCTGCGGATTGTGCGCGGTGTCATGTTGAAGGCGAACGGCTTTGCCGATGTGTGGCCGCAATTCTGGCCGCTGGCGCTCTTCACCGCGGCGGCCGGTGCGCTGGCGCTGGCCCGGTTCCGCCGCACGCTGGACTGA
PROTEIN sequence
Length: 377
MRFSLLRVRAILIKEYIQMRRDRLTLAMIVGVPVMQLFLFGFAINLDPKHLPTALTIEDPGAFSDSITAGLMNSDYFRVVRQTRSPAEARRLLDRGTVSFVVNIPANFSRDLVRGASPTILLEADATDPASGSRAVGAFQGLIENALRDDLKGPLAARAAASPAFQVAVHERYNPESNTQYNVVPGLLGVILTMTLVLMTSMAVTRERERGTYENLLAMPVRPLEIMTGKIAPYVIVGLIQSALILVATKIVFAVPMLGSLTLLSGALLLFIIANLAVGYTFSTVAKSQLQAMQMMVFFLLPSILLSGFVFPFRGMPGWAQALGEIMPITHFLRIVRGVMLKANGFADVWPQFWPLALFTAAAGALALARFRRTLD*