ggKbase home page

SCN18_25_8_15_R4_B_scaffold_1198_10

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(8451..9626)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 380.0
  • Bit_score: 503
  • Evalue 1.90e-139
mnmA; tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase (EC:2.1.1.61) similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 377.0
  • Bit_score: 483
  • Evalue 3.20e-134
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S7G6_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 374.0
  • Bit_score: 486
  • Evalue 2.30e-134

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
TTGCATGGGGGCGGCCACGGGGCCTATACGCTCGGCCCCATGACGGAAGCCTTGAACAGCCTTGGCCTTGCGAAGCCCGCCCGCGAAACCCGCGTGGTGGCGGCGATGTCGGGCGGGGTGGATTCCTCGGTCACGGCAGCACTTCTGAAGCGCGAAGGCTACGATGTCGTCGGCATCACGCTGCAGCTTTACGATCACGGTGCCGCCGTCCGCAAAAAGGGCGCCTGCTGCGCGGGGCAGGATATTCACGATGCCCGCCAGGTGGCCGGCGGGCTTGGTATTCCCCATTACGTGCTGGATTATGAAGCCCGCTTCAAAAAGGCGGTGATGGAGGATTTTGCCGCTGCCTATGCACGCGGTGAAACGCCCATCCCTTGCGTTCAGTGCAACAGCAAGGTGAAGTTCGCCGACCTTCTGGAAACCGCGAAGGAACTGGGTGCCGATGCGCTCGCCACCGGCCATTACGTGCGCCGGATGGAAGGACCTTTGGGGCCGGAGCTTCATTGCGCCGCCGATCTTTCGCGCGATCAGAGCTATTTCCTGTTCAACACCACGAAGGAACAGCTTTCCTTCCTGCGCTTCCCGCTTGGCGCATTGGAAAAGCCCGCGGTGCGCGCCATCGCGGTCGAGCTCGGGCTTGCGGTGGCGGAAAAGCCGGACAGTCAGGACATCTGCTTCGTGCCGGAGGGCGGCTATGCCGCGGTGGTGGAGCGGTTGAAGCCCGGTGCCGCCACGCCGGGCGAAATCGTGGATATGGAAGGCCATGTGCTCGGCCGCCATGATGGCGTCATTCATTACACCGTCGGTCAGCGCAAAGGTCTTGGCCTGTCCGGCAATGCCGAGCCGCTGTTCGTGGTGGCGCTGGAGGCGGAACGGGCCCGCGTGGTGGTCGGCCCGCGCGCGGCACTCCGTATACAGACGATTACGTTGCGTGAGGTGAACTGGCTGGTTCCCCCCGCGGCGATGGATTGCGCGGTCAAGGTGCGTTCGATGCGCCCGCCGGTTGCGGCCCGCGTCGTGCCGGGGCCGGACGGCACGGCCAGCGTGGAATTCCATGGCGCGGAGGATTCGGTCGCGCCCGGCCAGGCTTGCGTCTTTTATGAAGCCGGTGGCACCCGTGTGCTCGGCGGTGGTTTCATCGCGCGGGCCCATAGCAAGCTGAAAGCCGTTGCCTGA
PROTEIN sequence
Length: 392
LHGGGHGAYTLGPMTEALNSLGLAKPARETRVVAAMSGGVDSSVTAALLKREGYDVVGITLQLYDHGAAVRKKGACCAGQDIHDARQVAGGLGIPHYVLDYEARFKKAVMEDFAAAYARGETPIPCVQCNSKVKFADLLETAKELGADALATGHYVRRMEGPLGPELHCAADLSRDQSYFLFNTTKEQLSFLRFPLGALEKPAVRAIAVELGLAVAEKPDSQDICFVPEGGYAAVVERLKPGAATPGEIVDMEGHVLGRHDGVIHYTVGQRKGLGLSGNAEPLFVVALEAERARVVVGPRAALRIQTITLREVNWLVPPAAMDCAVKVRSMRPPVAARVVPGPDGTASVEFHGAEDSVAPGQACVFYEAGGTRVLGGGFIARAHSKLKAVA*