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SCN18_25_8_15_R4_B_scaffold_2574_6

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 5289..5924

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 184.0
  • Bit_score: 254
  • Evalue 8.50e-65
Peptide deformylase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUU9_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 184.0
  • Bit_score: 254
  • Evalue 6.00e-65
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 184.0
  • Bit_score: 254
  • Evalue 1.70e-65

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGGAATCCGGTCCGGAATCCGGCCTTTCCGGGGCCCCGTTTGGATGCTTTGACCGCGCTGGTGCCGGGCGCCATAGTCCGGCCATGGCAATCCTCAAGATCGCGCGCATGGGCCACCCCGTTCTGGCCCGCAAGGCCGAGCCGGTGAAAAATCCGGCCGATCCGGGCATTCAGAACCTGATCGCCTCGATGATCGAAACCATGATCGACGCCAATGGGGCAGGGCTGGCCGCGCCACAGGTCCATGTGCCACTCCGGCTGGTGGTGTTTCAGGCGCCCGAAAGCCGCAGCGATACCCTTTCGGAAGAAGAGCGTTTCGACCACACCGCGCCGTTGACCGTGCTGATCAATCCGGAGATCGAGATTCTGGGGCCGGAAACGGAAGGCGGCTGGGAAGGCTGTCTGTCGGTGCCGGGCCTGCGTGGCTTCGTGGAACGGCCGAACCATATCCGTTATCGCGGCCTCGATCAGAACGGGCAGCCGGTCTCGCGCGTGGCGCGCGGCTTTCACGCCCGCGTGGTGCAGCATGAATGCGATCACCTCGACGGCATTCTCTATCCCCGGCGCATGAACGACCTCTCGCAACTGATTTTCGAATCCGAAGTGCGCCACTGGCTGAAGGCGGAAAGCGAATGA
PROTEIN sequence
Length: 212
MESGPESGLSGAPFGCFDRAGAGRHSPAMAILKIARMGHPVLARKAEPVKNPADPGIQNLIASMIETMIDANGAGLAAPQVHVPLRLVVFQAPESRSDTLSEEERFDHTAPLTVLINPEIEILGPETEGGWEGCLSVPGLRGFVERPNHIRYRGLDQNGQPVSRVARGFHARVVQHECDHLDGILYPRRMNDLSQLIFESEVRHWLKAESE*