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SCN18_25_8_15_R4_B_scaffold_1781_9

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(7673..8572)

Top 3 Functional Annotations

Value Algorithm Source
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (EC:1.1.1.267) similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 298.0
  • Bit_score: 339
  • Evalue 5.70e-91
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 298.0
  • Bit_score: 339
  • Evalue 2.80e-90
1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2A9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 298.0
  • Bit_score: 339
  • Evalue 2.00e-90

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
TCGGAATTTGTCATGGTGGCCATTGTCGGTGCCGCGGCGATCGAACCTGCGCTGGCGGCCATTCGCCGTGGTGCAACCGTCGCCCTTGCCAACAAGGAATGCGTCGTGGCCGCCGGTGCGGTGTTTCGTGCCGCGCTGGACGGTTCATCTGCGACTGTGGTGCCGGTCGATTCCGAACACAACGCGATCTTTCAGGTTCTGAACGGTGGCGACGCCAGCCAGGTGGAGCGTGTGACGCTGACGGCCTCTGGCGGACCGTTCCGCGAATGGACGCTGGAGAAGATGCGTGACGTGACGCCGGAACAGGCGGTCGCTCATCCCAACTGGTCCATGGGCAAGAAGAACTCGCTCGACAGTGCCAGCCTGATGAACAAGGGCCTGGAGCTGATCGAGGCGCATTATCTTTTCGCTCTCCCGGATGAAAAACTGGACGTGGTGGTGCATCCGCAATCCATCATCCATTGCATGGTCACCTATGGTGACGGCACGACGCTGGCGCATCTTTCCGCGCCCGATATGCGGACACCCATCGCGCATGCCATCGGTTATCCCGTGCGCATCGCATCGCCTTCGCGCAAGCTGGACCTCGCCCATATGGGGCCGCTCAGCTTTTTCGCCCCGGATTCACAGCGTTTTCCGTGCCTGGATCTGGCGATGGGCTGTCTGCGCAGCGGTGGCCTCGCACCGACCATCCTGAACGCTGCCAACGAAATCGCGGTGGAAGCGTTTCTCGACCGCCGTATCGGTTTCCTCGACATTCCGCGCGTGGTGGAATCGGCGCTGGAAACCGGCGAAGCGAAATTGTCGAATACGCCACCGGCCGATCTCGAAACGGTGCTCTCTGCCGATGGGGAAGCACGTCGCTGGGCCGATGTTGCGTGCCGTTCACTCAGCGCTTGA
PROTEIN sequence
Length: 300
SEFVMVAIVGAAAIEPALAAIRRGATVALANKECVVAAGAVFRAALDGSSATVVPVDSEHNAIFQVLNGGDASQVERVTLTASGGPFREWTLEKMRDVTPEQAVAHPNWSMGKKNSLDSASLMNKGLELIEAHYLFALPDEKLDVVVHPQSIIHCMVTYGDGTTLAHLSAPDMRTPIAHAIGYPVRIASPSRKLDLAHMGPLSFFAPDSQRFPCLDLAMGCLRSGGLAPTILNAANEIAVEAFLDRRIGFLDIPRVVESALETGEAKLSNTPPADLETVLSADGEARRWADVACRSLSA*