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SCN18_25_8_15_R4_B_scaffold_2463_9

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(5159..5689)

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane protein-like protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRI4_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 167.0
  • Bit_score: 139
  • Evalue 1.80e-30
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 167.0
  • Bit_score: 139
  • Evalue 5.10e-31
Integral membrane protein-like protein {ECO:0000313|EMBL:ABS62517.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 167.0
  • Bit_score: 139
  • Evalue 2.50e-30

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGAAGGTCCGGCTTTTCCGCGCGCTGCCCTGGGTGCTGGCCACGCTGGTGATCGCGATCGGCGTGCATCTGGCGCTGCTCTATCAGATACCGGGCTATGTGATGGAAAAGGCGCTGGCGCGCGTGGGCCCCGCAAACACCATCGTCCACGGCAAACGGGTGGATGCGACCGCGCGCGCGATCGTCAGGCCATCGCCGGAGCTGCTTTATTCCACCTGCCCTTACGATGTTTCGCAGCGGCCGTTGCGCATCACCGCCGAGGTGCCGCAAGGGACGTACTGGTCGGTTTCGTTCTTCGATGACGAGACCAACAATTTCTACGTCAGGAACGACCGGCAGGTGAAAGGCGGTCATATCGACATCCTGCTGATGGCGGCCGCGCCGCTGGACAAACCGCTGCCCAAAGGCGCGGAGATCGTGCATGCGCCAAGCCTGAAAGGGCTGGTGCTGTTTCGCACCCTGATCAACGACGACGCGCAGTTCGCGGCCATCGATGCCGCGCGGCGCACGGCCGATTGCGCGTCCTACTGA
PROTEIN sequence
Length: 177
MKVRLFRALPWVLATLVIAIGVHLALLYQIPGYVMEKALARVGPANTIVHGKRVDATARAIVRPSPELLYSTCPYDVSQRPLRITAEVPQGTYWSVSFFDDETNNFYVRNDRQVKGGHIDILLMAAAPLDKPLPKGAEIVHAPSLKGLVLFRTLINDDAQFAAIDAARRTADCASY*