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SCN18_25_8_15_R4_B_scaffold_2268_8

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 4577..5206

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, TetR family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z961_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 193.0
  • Bit_score: 202
  • Evalue 2.70e-49
putative transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 193.0
  • Bit_score: 202
  • Evalue 7.60e-50
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:CBS87521.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 193.0
  • Bit_score: 202
  • Evalue 3.80e-49

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGAAGCCACCCAATCCCGTTGGCATCGCCGCAAGGACGCAAGGCCCGCAGAAATTCTGGAGGCGGCACTCGCCGTCTTCGCGGAGAAAGGCTTCGCCGCGGCGCGCATGGAAGACATTTCGCGCCGGGCCGGTGTCACCAAGGGCACGATCTATCTTTATTTCGACAGCAAGGAATCGCTGTTCAAGGCACTGATTCGCCAATCCATCAGCCCGGCCATCGCCGGCGCGAAGGAACAGGTGAATAATTTTCACGGGCCTGCGGGCGATCTGCTGCGGCTGGTATTGACCCGCATCGGCCATTTCATCGCGACCAGCGACCGGGTGGTGCTGCCCAAGATCATCGTCGCCGAGGCTGGAAATTTTCCCGAACTCGCCCGCTTCTATCGTAACGAGATCATCGCGCAGGGGCTTGGCCTGCTCACGGGCCTGATCGCGCGCGGTGTGACAAGCGGTGAATTCCGCGCCGTCGATCCGGGGCATGTCGCGCGGATTTCTATCGCGCCGCTGCTGCTCGCCGCCTTCTGGCGGACGAGTTTCGCACAATTCGACGACGAACCTTATGACCACGCCGGCATGATCGAAACCCACATCGATCTGCTTCTGGCCGGTCTCTCCGCCGGAGGCTGA
PROTEIN sequence
Length: 210
MEATQSRWHRRKDARPAEILEAALAVFAEKGFAAARMEDISRRAGVTKGTIYLYFDSKESLFKALIRQSISPAIAGAKEQVNNFHGPAGDLLRLVLTRIGHFIATSDRVVLPKIIVAEAGNFPELARFYRNEIIAQGLGLLTGLIARGVTSGEFRAVDPGHVARISIAPLLLAAFWRTSFAQFDDEPYDHAGMIETHIDLLLAGLSAGG*