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SCN18_25_8_15_R4_B_scaffold_2395_1

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 465..881

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW84_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 138.0
  • Bit_score: 220
  • Evalue 8.20e-55
TraR/DksA family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 138.0
  • Bit_score: 220
  • Evalue 2.30e-55
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 138.0
  • Bit_score: 220
  • Evalue 1.20e-54

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGGGAATCGAACTTCCCGCCGGCTACAGACCGTCGGAGAGTGAGCCCTTCATGAATGAAAGGCAGCGCGAATATTTTCGGCGCAAACTGGCCCGTTGGAAAGACGAGATTTTACGCGAAAGCCGCGAAACCATCCAGAATCTGCAAACTGAAACCACGCCTTTCGCCGATCTGGCCGATCGTGCCTCCACCGAGGCCGAACGTCAGCTCGAACTGCGCACCCGCGACCGCCAGCGCAAGCTGATCGCCAAGATCGATGCCGCGCTACGCCGCCTTGAAGACGGCTCTTACGGATTTTGCGAAGAAACGGGCGAACCCATTTCGCTGAAGCGGCTGGACGCACGGCCCATCGCCACCCTTTCGATCGAGGCACAGGAACGCCACGAACGGCGCGAGCGCGTTTATCGCGACGATTGA
PROTEIN sequence
Length: 139
MGIELPAGYRPSESEPFMNERQREYFRRKLARWKDEILRESRETIQNLQTETTPFADLADRASTEAERQLELRTRDRQRKLIAKIDAALRRLEDGSYGFCEETGEPISLKRLDARPIATLSIEAQERHERRERVYRDD*