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SCN18_25_8_15_R4_B_scaffold_3933_2

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 1028..2590

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 514.0
  • Bit_score: 721
  • Evalue 7.90e-205
2-isopropylmalate synthase n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DHN0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 522.0
  • Bit_score: 716
  • Evalue 1.80e-203
2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 512.0
  • Bit_score: 692
  • Evalue 7.90e-197

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
ATGAGTACGAATTCTGAGGGTCACGAGCGAGTTCGCATCTTCGACACCACGCTGCGCGATGGAGAACAATCTCCCGGCGCGGCGATGACACATCAGGAAAAGATCGAAGTTGCCGAACTGCTCGATGCCATGGGTGTCGACATCATCGAGGCGGGTTTCCCGATTTCCTCGGTGGGCGACTTTGAAGCGGTCAATGAAATTGCCAAGCGCACGAAGAACGCGGTGATCTGCGGCCTGTCGCGCGCGGGCTTCAAGGACATCGACCGCGCGGGCGAGGCGTTGAAGCCGGCCAAGCGTTTCCGCATTCACACCTTCATCTCCACCAGCCCCGTGCATATGAAGCACAAGCTGCAGATGGGACCCAATGCGGTGCTGGATGCGGTGGGCGCATCGGTGGTGCGGGCACGCAATTTCACCGACGATGTGCAGTGGAGCGCGGAAGACGCAACGCGGACGGAGCCCGATTTCCTCTGCCGCTGTGTGGAACTGGCGATCCGTTCCGGCGCCACCACGATCAATATTCCCGATACCGTGGGCTATACCACGCCGCAGGAATATGTGGCGCTGATCCAGATGCTGCGCAATCGCGTGCCGGATGCGGACAAGGTGATCTTTTCCACCCATTGCCACAACGATCTGGGCCTGGCGGTGGCCAATTCGCTGGCGGGCATCATCGGCGGTGCGCGGCAGGTGGAATGCACCGTCAACGGCATCGGTGAGCGGGCGGGCAACGCCGCGCTGGAAGAAATCGTGATGGCGCTGAAGGTGCGCAAGGATGCGATGGCCTTCACCACCGGCATCGACACGCGGATGCTGGCGCGCGCCTCCAAACTCGTCTCCAACGTCACCGGCTTTCCGGTGCAGTACAACAAGGCCATCGTCGGCAAGAATGCCTTCAGCCATGAATCCGGCATCCATCAGGACGGCATGCTGAAGAATGTCGAGACCTACGAGATCATGCGCCCCGAAGATGTGGGGGTGAAGGAAACCTCGCTGGTGCTGGGCAAGCTGTCGGGCCGGCACGCCTTCCGCGAGAAGCTGTCGAGCCTCGGCTACGATCTGACCGATGAGGCGTTCGCGGAAACCTTCCGCCGCTTCAAGGCGCTGGCCGACCGCAAGAAGCATGTTTTTGACGAGGACATTGTCGCCCTTGTCGATGACGGTGTGATCCGCGGCAAGGATACGATTTCGGTGCAGTCGCTGAAGATCGAGACCGGCATCGGTGTGGCACCCGCGGCCGAGATGACACTTTCGGTCGATGGCGAAATCCGCAGCGGAAAAACCACCGGCGATGGCGCTGTGGATGCGGTGTTCGCCGTGATCCGCGCGCTTTATCCCCATCCGGCCCATCTGCAACTGTTTCAGGTGCAGGCGGTGACGGAAGGGACCGATGCACAGGCGAATGTCAGTGTGCGGCTGGAAGAAAACGGCCGCACCGTGACGGGGCGCGCCGCCGATACCGATACGCTGGTGGCCGCGGCATACGCCTATGTGAATGCCTTAAACAAACTGTTGGTGAAACGTACGAAGCAGGCGCCGGAAGCATTGACGGTCGCGCGATAG
PROTEIN sequence
Length: 521
MSTNSEGHERVRIFDTTLRDGEQSPGAAMTHQEKIEVAELLDAMGVDIIEAGFPISSVGDFEAVNEIAKRTKNAVICGLSRAGFKDIDRAGEALKPAKRFRIHTFISTSPVHMKHKLQMGPNAVLDAVGASVVRARNFTDDVQWSAEDATRTEPDFLCRCVELAIRSGATTINIPDTVGYTTPQEYVALIQMLRNRVPDADKVIFSTHCHNDLGLAVANSLAGIIGGARQVECTVNGIGERAGNAALEEIVMALKVRKDAMAFTTGIDTRMLARASKLVSNVTGFPVQYNKAIVGKNAFSHESGIHQDGMLKNVETYEIMRPEDVGVKETSLVLGKLSGRHAFREKLSSLGYDLTDEAFAETFRRFKALADRKKHVFDEDIVALVDDGVIRGKDTISVQSLKIETGIGVAPAAEMTLSVDGEIRSGKTTGDGAVDAVFAVIRALYPHPAHLQLFQVQAVTEGTDAQANVSVRLEENGRTVTGRAADTDTLVAAAYAYVNALNKLLVKRTKQAPEALTVAR*