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SCN18_25_8_15_R4_B_scaffold_1960_5

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(5483..7024)

Top 3 Functional Annotations

Value Algorithm Source
AMP-dependent synthetase and ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR94_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 511.0
  • Bit_score: 653
  • Evalue 1.10e-184
long-chain-fatty-acid--CoA ligase similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 511.0
  • Bit_score: 653
  • Evalue 3.10e-185
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABS62427.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 511.0
  • Bit_score: 653
  • Evalue 1.50e-184

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1542
ATGCAAACCTTTGTTCGTGTGGGGGAACGCTCTTTTCCCCGTGTCGAGATCGAACAAAGGGGCCTTCGTGGGGCATCCGCTTTTGCTTCCCTCGGGTTGAAGGCGGGGGAAACGGTGGCGCTGATCATGCGCAACGATTTCCCGTTTCTGGAGGCGATGCTGGGCGCCGGCGTGCTCGGCCTCTATGTCACGCCGGTCAACTGGCACAACACTGCGGCCGAGGCCGCCTATATCCTGAACGATTGCAAGGCGAAGGCCATCGTCATCCATGCCGATCTGCTGCATGGGCTGAAATCGGTTCTGCCCGCCGGCGTGCCGGTGTTCGTGGTGGAAACGCCCGCTGATATTCGCGCGGCCTATCACATCGCGCCGGAAGCGTGCGCGGTGCCGAACGGTGCGCGCCTGTGGTCCAGCTTCATTGAAGGCTTTCCGCCTTATACCGGCGCGCCGGTGGAGGCGCCGGGCGCGATGATCTACACCTCCGGCACCACGGGAAAGCCCAAGGGCGTGCGCCGTTTGCCGCCCACGCCGGAACAGGCGGTCGCAACCCAGGCGATGGTTGCAACGCTGTTCGGTGCGGATGGGCGCGATCCTGAAACCATCGTCTCTTATGCCGCAGGCCCCCTCTATCACAGCACGCCCAATGCCTGGGGGCCTTACTTCTTCCGCCTTGGCGCCAATGTCATCATCGCGCCGCGTTTCGATGCGGAAGGTCTGCTGCGCGACATCGAACGCTATCGCGTCACCCATCTCCTCACCGTGCCCACCATGTTCGTGCGGCTCTTGAAGCTGCCGGAGGAGGTGCGCAAGAAATACGATCTTTCCAGCCTTCAATTCGTGATGCATGGCGCAGCGCCTTGCCCGGTTGAGGTCAAACGCCGGATGATCGAATGGTGGGGGCCGGTGATCTGGGAACATTATGGCGGCACCGAAACCGGCGCGGTCACCATTTGCGATTCCAAGCAATGGCTTGCCCATCCCGGCACGGTCGGCTGCGCACTGCCCGATGCCGAAGTGCGGGTGCTGGGCAAGAACGGTGAAACGCTGCCGCCGAACGAAGTGGGCGAGGTTGCGTGCTGGCGCCCCGCTTATCCCGATTTCACCTATAACGGTGATGATGAAAAGCGGCGCAAGGCCAGCCGCGGCACCCTGCTCAGCCTCGGCGATGTCGGCCATCTCGACAGCGACGGCTTTCTCTATCTCTCCGGCCGGTCGAGCGACATGGTGATTTCCGGCGGGGTCAACATCTATCCGGCGGAAATCGAATCCGAGCTTTACAAGATGCCGGGCGTGGCCGATTGCGCGGTCTTCGGCATCCCGGATGAGGAGTTTGGCGAACAGGTCTGCGCCTTCATCCAGCCGCAGCCGGGGCAGAAACTCAGCATCGACGATGTGAAGGGCTTTCTGGCCGATCGTCTCGCCCGCTACAAAATCCCCAAGCGGATCGAGTTTGTGGACACTCTGCCGCGTGAGGATTCGGGCAAGATCTTCAAGCGCAAATTGCGCGAACCGTTCTGGGCCAATGCCGGCCGTACTGTTTAG
PROTEIN sequence
Length: 514
MQTFVRVGERSFPRVEIEQRGLRGASAFASLGLKAGETVALIMRNDFPFLEAMLGAGVLGLYVTPVNWHNTAAEAAYILNDCKAKAIVIHADLLHGLKSVLPAGVPVFVVETPADIRAAYHIAPEACAVPNGARLWSSFIEGFPPYTGAPVEAPGAMIYTSGTTGKPKGVRRLPPTPEQAVATQAMVATLFGADGRDPETIVSYAAGPLYHSTPNAWGPYFFRLGANVIIAPRFDAEGLLRDIERYRVTHLLTVPTMFVRLLKLPEEVRKKYDLSSLQFVMHGAAPCPVEVKRRMIEWWGPVIWEHYGGTETGAVTICDSKQWLAHPGTVGCALPDAEVRVLGKNGETLPPNEVGEVACWRPAYPDFTYNGDDEKRRKASRGTLLSLGDVGHLDSDGFLYLSGRSSDMVISGGVNIYPAEIESELYKMPGVADCAVFGIPDEEFGEQVCAFIQPQPGQKLSIDDVKGFLADRLARYKIPKRIEFVDTLPREDSGKIFKRKLREPFWANAGRTV*