ggKbase home page

SCN18_25_8_15_R4_B_scaffold_4598_3

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(2029..2835)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWE1_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 260.0
  • Bit_score: 292
  • Evalue 3.30e-76
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:GAK46078.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 259.0
  • Bit_score: 304
  • Evalue 9.10e-80
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 260.0
  • Bit_score: 292
  • Evalue 9.40e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGGGAGAGAAGAGCCTGCAAGGCAAAGTGGCAATCGTGACGGGTTCAGCCTCCGGCATCGGGGCCGCGACCGCCATCGGGCTGGCCGAACGCGGCGCCAATGTGGTGGTGAATTATGCGAGCAGCGCGGACGCGGCGCAGAAAACCGCCGACGCGGTGAAGGCGGCAGGCGCCGATGTGCGGCTGGTGCAGGCCAATGTGGCCGAAGACGCCGATTGCAAGAATCTGGCGCAGGCCGCGCTGGATGCGTGGGGCCGGATCGACATTCTGGTGAACAATGCCGGCACCACCAAATTCGTCGCCCATCATGAGTTGAATGGGCTGAGCGCGGAGGATTTCGCCCGCATTTACGCGGTGAATGTGGTGGGGCCGTTCCAGATGGTGCGGGCCTGCGAGGCGGCGCTGAAGGCGCATGGGCCGGGCATGGGATCGGTGGTGAATGTGTCGTCCATCGCGGGCGTGGCGGGCATCGGCTCCTCCATCGCCTATGCGGCCTCGAAAGGGGCGCTGAACACGATGACCCTGTCGCTCGCCCGCGCGCTGGCGCCGAATATCCGCGTCAATGCGGTGTGCCCCGGCTATGTCGAGACGCCGTGGTTCTCCAAACGCTTCGGCGCGGACAGCGCGGGCCGCATCAAGGACCAGCAGGAAAAATCCAATCCGCTGGGGCTGACCGCCGATGGCGCGGAAATCGCCCGGACGGTGATGTTCTTCTGCAGCCCCGAGGCGCGGAATATCTCAGGCGAGCGGCTTCTGACCGACAGCGGCATGCACCTGACCGGATTCGGCGCGGGCGATAAACGCTGA
PROTEIN sequence
Length: 269
MGEKSLQGKVAIVTGSASGIGAATAIGLAERGANVVVNYASSADAAQKTADAVKAAGADVRLVQANVAEDADCKNLAQAALDAWGRIDILVNNAGTTKFVAHHELNGLSAEDFARIYAVNVVGPFQMVRACEAALKAHGPGMGSVVNVSSIAGVAGIGSSIAYAASKGALNTMTLSLARALAPNIRVNAVCPGYVETPWFSKRFGADSAGRIKDQQEKSNPLGLTADGAEIARTVMFFCSPEARNISGERLLTDSGMHLTGFGAGDKR*