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SCN18_25_8_15_R4_B_scaffold_5451_6

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 3121..3396

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB10 component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QDW7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 92.0
  • Bit_score: 140
  • Evalue 7.20e-31
Conjugal transfer protein TraI {ECO:0000313|EMBL:KIZ48060.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 92.0
  • Bit_score: 140
  • Evalue 1.00e-30
trbI2; conjugal transfer protein trbI similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 92.0
  • Bit_score: 139
  • Evalue 2.70e-31

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
TTGCCCGCGCGATATGCAGCAAGGCTTTCTATTATTCGGCTATATGACAGCCCGACCGGGCGCTATCTCCTGATCCCGCAGGGCGCGCGGCTGATTGGTCAATACGACAGCCAGATTTCTTTCGCGCAGAGTCGTGTACAGCTGGTGTGGACGCGGCTCATCCTGCCGAACGGCAAATCCATCGTGCTCGAAAGTCAGCCCGGCGTTGATCCGGAAGGCTATTCCGGCTTGGAGGATGCCGTGGACAATCATTGGGGCACGCTATTCAAGGCAGCG
PROTEIN sequence
Length: 92
LPARYAARLSIIRLYDSPTGRYLLIPQGARLIGQYDSQISFAQSRVQLVWTRLILPNGKSIVLESQPGVDPEGYSGLEDAVDNHWGTLFKAA