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SCN18_25_8_15_R4_B_scaffold_5807_2

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 242..976

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BZI3_HYPNA similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 238.0
  • Bit_score: 125
  • Evalue 4.90e-26
Uncharacterized protein {ECO:0000313|EMBL:KCZ54553.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 235.0
  • Bit_score: 138
  • Evalue 1.00e-29
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 238.0
  • Bit_score: 125
  • Evalue 1.40e-26

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGAAAAAATATATGCGATTGAAACTGATGCTGATTGACGGTGAACGAAAAATGGATGCCGCGGCCAAGGAGCTGTCACGCCGGGACCTCGGGAAGAAAGAGCGGCGCACGCGCATCGTGAATGCTGCGTATGATCTGCTGCGCGAGGCGGGCGTTGATGCGCTATCCGTGATAAAGGTTGCGGAGCGTGCGCGTGTCAGCCCTGCGACCGTTTACAACCTTTTCGGAACCAAGGGCGCTATTCTCGCGCATGTTTTTGATCAGGATTTAAAGGCTTTCACAACGGTTGTCGGCCGTGCGCGGGCTGCCGATGCGCTCGATCATATCTTCAAGGCGATTTCCATTGCGGCGGGTTTGTACAAGGAGGATCCCGGCTTTTACCGCGCCATCATGCATATGCGGCCAAATCAGGCGGATCCGGATCTTTATGCGGCCATGCGTGCGCCCAGGATCGAGTTTTGGCGCGGCATGATTCACAAGGCCGGTGAAGAAGGCCTTCTGAGACGGGACGCGAATAGCGGTATTCTTTCCGTCCTCGCGACACAGATCGCGAGTGGTGTTCTTGCTGAATGGGTTTCAGGCGTCATCTCTGCGGATCAGCTCGAACGGGAAACGAGCTACGGCTTCGCCGTCATCCTGATGCAATACGCAACGTCAAAGGGTGCGAAGAAACTGGCACCGCGCGTCGCGGCTCTGGAAAAGGCCCTTGCGCAAACTGGCCGCCGCCGCGCTTAG
PROTEIN sequence
Length: 245
MKKYMRLKLMLIDGERKMDAAAKELSRRDLGKKERRTRIVNAAYDLLREAGVDALSVIKVAERARVSPATVYNLFGTKGAILAHVFDQDLKAFTTVVGRARAADALDHIFKAISIAAGLYKEDPGFYRAIMHMRPNQADPDLYAAMRAPRIEFWRGMIHKAGEEGLLRRDANSGILSVLATQIASGVLAEWVSGVISADQLERETSYGFAVILMQYATSKGAKKLAPRVAALEKALAQTGRRRA*