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SCN18_25_8_15_R4_B_scaffold_5214_4

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(1645..1992)

Top 3 Functional Annotations

Value Algorithm Source
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GN46_RUEST similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 117.0
  • Bit_score: 73
  • Evalue 1.40e-10
nucleic acid binding, OB-fold, tRNA/helicase-type similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 117.0
  • Bit_score: 73
  • Evalue 3.80e-11
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ABF61920.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. (strain TM1040) (Silicibacter sp.).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 117.0
  • Bit_score: 73
  • Evalue 1.90e-10

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGAAGCACGCAGCTTTTGCGTTCCTCCTGCTGCTGTGGCCCGCCGCCGGCTTTGCCGCCACGGTGTCGGCGGCGGATGCGGCGGCTCACGCCGGGCAGAGTGTTACCGTCGAAGGCTACGTAAGCGAAGTCCACACGGCGCGCAGCGGCAAGGCGACGTTCGTTGACCTGGACGGACGCTATCCCGGCCAGGCGTTCACCGCGGTGGTTTTCTCAAGCGATATGGCGGCCGTTGGCGACGTTGGCGGCCTTGCGGGGAAGACTATGGGCATCACAGGCCAAGTGCAGATGTATCGTGGGCGGCCGGAGATCATTGTGCATTCGCGGGCGCAGTTTCACAGGTGGTAA
PROTEIN sequence
Length: 116
MKHAAFAFLLLLWPAAGFAATVSAADAAAHAGQSVTVEGYVSEVHTARSGKATFVDLDGRYPGQAFTAVVFSSDMAAVGDVGGLAGKTMGITGQVQMYRGRPEIIVHSRAQFHRW*