ggKbase home page

SCN18_25_8_15_R4_B_scaffold_14494_1

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 1..978

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZ49_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 327.0
  • Bit_score: 285
  • Evalue 4.90e-74
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDO59818.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 325.0
  • Bit_score: 298
  • Evalue 6.00e-78
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 327.0
  • Bit_score: 286
  • Evalue 6.20e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
CGCGCGCTGGCCGATGCGATGCTGAAGGCGGCCGAGATGGGGGTGAGCGATTCCGGCAAGCGCGATCTTCTGTTGATGCCGGTGGATGAAGGCAGCAACCCGGCCGAAACCGCCACCGCGGCACGCAAACTGCTGGATCAGGGGGCGGAGATCATTATCGGGCCGTTGTTCGCCTCCGCCGTTTCCGCCGTGGCGCCCATTGCGCGCGACCGCGGTGTGCCGGTGCTGGCCTTCTCGACCGACCGCACCGTGGCGGGCCACGGGGTTTATCTGTTGAGCTTCCAGCCCGAAGACGAAGTGCGCGCGATCGTCACCTATGCCGCCAGCCAGGGCCACACCCGCTTCGCCGCGCTGACACCGCTGACCCCTTATGGCGACCGGGTGACAGCGGCTTTCCGCACCACAGTCCAGGATGTGAAAGGCACGGTTTCGGGAATCGAACGCTTCGATCCTTCGTCCGGCACCGCGGTGGCGCAATCCGCCGCCATAGCAAAGGGTCAGCCCGATTCGGTGCTGATCGCACAGGGCGGCGCGTTGTTGCGCGGCATTGCGCCGACACTGGTGGTGAACGGGCTTCCGCCGGAGACGGTCAAGTATCTCGGCACCGGGGTGTGGGACGACCCCACCATTGCACAGGAACCGGCGCTGCAGGGCGGCTGGTTCGCCGCCCCCACCCCCAATGCGCAGGATGGTTTCGACGCCCGTTTCCAGGCCGTGTTCGGCACCACACCGCCGCAGCTTGCCACGCTTCCTTACGACGCGGTGTCGCTGGTGGCGCTGCTGTCGGCGGGCGAACCCTATCACCGCTTCACCGATGCGGCCCTGACCGATCCCAACGGTTTCGCCGGTGTGGACGGGATTTTCCGCTTCTTCCCCGATGGTTCGGATGAGCGCGGGCTTGCCATTCTGCGGGTGGCGCCGGACGGCTTTCAGATCCAGCAGCCGGCGCCGACCACCTTCCAGCCACTCGGTGGATAA
PROTEIN sequence
Length: 326
RALADAMLKAAEMGVSDSGKRDLLLMPVDEGSNPAETATAARKLLDQGAEIIIGPLFASAVSAVAPIARDRGVPVLAFSTDRTVAGHGVYLLSFQPEDEVRAIVTYAASQGHTRFAALTPLTPYGDRVTAAFRTTVQDVKGTVSGIERFDPSSGTAVAQSAAIAKGQPDSVLIAQGGALLRGIAPTLVVNGLPPETVKYLGTGVWDDPTIAQEPALQGGWFAAPTPNAQDGFDARFQAVFGTTPPQLATLPYDAVSLVALLSAGEPYHRFTDAALTDPNGFAGVDGIFRFFPDGSDERGLAILRVAPDGFQIQQPAPTTFQPLGG*