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SCN18_25_8_15_R4_B_scaffold_20947_1

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(243..950)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3T2_THECD similarity UNIREF
DB: UNIREF100
  • Identity: 32.5
  • Coverage: 197.0
  • Bit_score: 108
  • Evalue 6.00e-21
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 197.0
  • Bit_score: 108
  • Evalue 1.70e-21
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACY97985.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.5
  • Coverage: 197.0
  • Bit_score: 108
  • Evalue 8.40e-21

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGCCCAAAAAAGTCGACCACAAGGCCCGCCGCGAGGCATTTCTGGAAGCGGCCTACCGCCTGATCAAAAAACACGGACTGTCGGGGGTTACAGTGCGTTCGGTCGCGCGCGAAGCGGGCTTCACCACGGGCGCGCTGGTGCACTATGTGGAATCAATGGACGAATTGCTGGTGGAAGCATCGGAATATGCCGCGCGCGATGTCCGCGCCCGCATGCTGGATATGGAGGCACACCCCGATCCCCTGATTTCCTTGCGAGAAGTGCTGTATCTGGCGCTTCCGAGCGACGAGGACAAGCGCGGAAACTGGAACTATTGGCTGGGCTTCTGGGAACGCTCCGTTCACAACGAAGCGGTGCGCAAAACCACGGAGCTGCGTTATACGGAATGGCTGAAGCGTACATCACGCCTGATCCGGCGGGCGCAAAAGGCCGGCGATCTTGCGCCAGGCCTTAACATCTCCCTTGCTTCCCGCGCCGCCGTCGCCCTGATCGATGGAATAGCGACACAGGCCTTACGCTCCGGCCAGCCGCTTCGCGTCAATGAACAATACGCCCTGATCGATAACTGGATCGATTGCTGGCTGAAGCCGGTGCGCCCGATTGGGCGGGCAGAAGATACAACAACCGCACGCAAGCAGCCGAAAGCGCGGACTGGGCCATCGCGCAACGCCGCCACCCGCCGCATTTCCGCGGCGCCTGTCCTCTGA
PROTEIN sequence
Length: 236
MPKKVDHKARREAFLEAAYRLIKKHGLSGVTVRSVAREAGFTTGALVHYVESMDELLVEASEYAARDVRARMLDMEAHPDPLISLREVLYLALPSDEDKRGNWNYWLGFWERSVHNEAVRKTTELRYTEWLKRTSRLIRRAQKAGDLAPGLNISLASRAAVALIDGIATQALRSGQPLRVNEQYALIDNWIDCWLKPVRPIGRAEDTTTARKQPKARTGPSRNAATRRISAAPVL*