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SCN18_25_8_15_R4_B_scaffold_18089_2

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(477..863)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 122.0
  • Bit_score: 178
  • Evalue 3.60e-42
Ribonuclease VapC n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DKT7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 123.0
  • Bit_score: 178
  • Evalue 3.30e-42
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 122.0
  • Bit_score: 178
  • Evalue 7.20e-43

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGACCGTTACTAGGCCCCGGGTCGTCGATACCTCCGCCTGGATTGAATGGCTGACGGCGAGCGCCACCGGCAAACTGCTGGAAAAGGAATTGCCACGGCGGCCGCACTGGATCGTGCCAACGATCGTTCAACTGGAATTGTCCAAGTGGCTCACGCGTGAGGCCAGCGAAGAAAAGGCCGATCAGGTCATAGCGTTTACGCAGAAATGCGTCGTCGTGCCTTTGGACACACGCCTTGCGCTGTCCGCTGCCGATCTGCACCGGCAGCACAAACTGGCGACCGCTGACGCCATTGTTTATGCAACCGCCTTGCAGCAGGAGGCCGACCTTCTGACCTGCGATCAGCATTTCGCGCGGCTTCCCGGCGTTGTGCTCATCCACAAGTAA
PROTEIN sequence
Length: 129
MTVTRPRVVDTSAWIEWLTASATGKLLEKELPRRPHWIVPTIVQLELSKWLTREASEEKADQVIAFTQKCVVVPLDTRLALSAADLHRQHKLATADAIVYATALQQEADLLTCDQHFARLPGVVLIHK*