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SCN18_25_8_15_R4_B_scaffold_21155_2

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(718..1347)

Top 3 Functional Annotations

Value Algorithm Source
glycogen debranching protein (EC:3.2.1.33) id=24459368 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 154.0
  • Bit_score: 131
  • Evalue 5.80e-28
glycogen debranching protein similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 95.0
  • Bit_score: 130
  • Evalue 3.70e-28
Tax=CG_Arma_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 122.0
  • Bit_score: 144
  • Evalue 1.20e-31

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
GCGGGTGGCGGCGGCGATGTCGGGGAGGGCGGAGCCGAAGGCCTCGACGGTCATCCAGCCGTCATAGCCGGACGCTTTCAGCGCCTTGAAGATGGTGGCGAAGTCGATCTGGCCCGTGCCCGGCGTGCCGCGATCGTGGCGGCTGCGCCCTCCAGTGAGCCGGTTGTCCAGGCCCTGGTGGCCGCCGCCGACCAGTTCATTGTCCAGCGCGGCTCTCTCAAGACCGTCATCGCCGGCTACCCTTGGTTCTCCGACTGGGGGCGGGACACGATGATTGCCCTGCCCGGGCTCACTCTACACACCGGGCGCCCGGAAACGGCGCGCCAGATCCTGCAGGCGTTCGCGGAGAGCGTTGATCAGGGGATGCTGCCCAATCGCTTTCCGGACGCGGGCGAGGCGCCGGAGGCTGAACGTCTGTTCAATGGCCGCATGATCGCGGCCTTGCGCACATTGTCCGACACCACCGGCGTTCCGGCCGGCAGCCGCACGGCGCAAATCGATGTGGTGCTGCTCGCCGCCTGTCTTACCGGGCTTGCGGTGCTCGCCCGTTCGGGGCGGCTAGCTGCATTGGGTTTCGCGGCGGACGATGTCCTCGCCCGTCTCGATGCGCGCTTCTCAAGCCACGGCTGA
PROTEIN sequence
Length: 210
AGGGGDVGEGGAEGLDGHPAVIAGRFQRLEDGGEVDLARARRAAIVAAAPSSEPVVQALVAAADQFIVQRGSLKTVIAGYPWFSDWGRDTMIALPGLTLHTGRPETARQILQAFAESVDQGMLPNRFPDAGEAPEAERLFNGRMIAALRTLSDTTGVPAGSRTAQIDVVLLAACLTGLAVLARSGRLAALGFAADDVLARLDARFSSHG*