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SCN18_25_8_15_R4_B_scaffold_26203_1

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(3..212)

Top 3 Functional Annotations

Value Algorithm Source
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 60.0
  • Bit_score: 113
  • Evalue 7.70e-23
Fumarate hydratase class II n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVX1_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 60.0
  • Bit_score: 113
  • Evalue 5.50e-23
fumC; fumarate hydratase similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 60.0
  • Bit_score: 113
  • Evalue 1.60e-23

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGCCGCAGAGCGCCGCCCGCGCGGAGAAGAAGACGCGCACCGAAACCGACTCCTTCGGTCCCATCGAGGTGCCGGCGGACCGCTACTGGGGCGCCCAAGCCGAACGCTCGCTGGAAAACTTCCGCATCGGCTGGGAGAAGCAGCCGCTCCCCATCGTGCGTGCGCTCGGCATCATCAAGCGCGCCGCCGCGGAGACCAACATGGCCCTC
PROTEIN sequence
Length: 70
MPQSAARAEKKTRTETDSFGPIEVPADRYWGAQAERSLENFRIGWEKQPLPIVRALGIIKRAAAETNMAL