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SCN18_26_2_15_R1_B_scaffold_1884_31

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(25040..26368)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I308_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 445.0
  • Bit_score: 651
  • Evalue 6.10e-184
Two component, sigma54 specific, transcriptional regulator, Fis family protein {ECO:0000313|EMBL:EHK52646.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 445.0
  • Bit_score: 651
  • Evalue 8.50e-184
Two component, sigma54 specific, transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 439.0
  • Bit_score: 506
  • Evalue 6.80e-141

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGCTGCATGAAAGAGGAATTGGGCTGGTGGAGGACGATCCCGTCATGGGCGGGTCGCTCGTGCAGCGGCTGGAACTCGAGGGCTGGAAAGTCAATTGGTGGCAGACTGGCCGGGCTGCCATGACGGAGCTTCCGGCGACAGCGGGTTCGCTCGATCTCGTCGTCTGCGACATCAAGCTTCCGGACGTCTCGGGAGAGGAGGTGTTCCGCCAGCTTGCTCGGGAGCCTGGGATGCCTCCGTTCCTCTTCGTCACGGGATTCGGCGATATCGACCAGGCTGTCAGGCTCATGCGGGCGGGCGCGGCCGATTTCCTGACAAAGCCCTTCGAGATGGAAGCGTTCCTGAAACGGATCGAGGCTGGTCGCCGGCTGTCTGCTGGCAGCGGCCCCGCCGCCCACACGCTTGGCGAATCCCCGGCGATCCGCAACGTCGAGGATGTCTTGAGACAGTACGCCCGGCACGAGCTGCCGGTGCTCGTCACCGGCGAAACGGGTAGCGGCAAGGAAGTGGCCGCCCGCCTCCTGCATCAAATCTCCGGACGCGCCGCCGAACCGTTCGTCGCCGTTAACTGCGCCGCAATCCCGGCGGACCTCATGGAAAGCGAGATATTCGGGCACGAGAAGGGAGCCTTCACAAGCGCGCAGGCGCGCCATCTCGGTTACGCGGAACGTGCCGGAAAAGGCACGCTGTTCCTCGACGAGATCGGCGATATGCCCCTTTCGCTCCAGGCCAAACTGCTGAGGTTGGCCGAGGACGGGACATTCACCCGCGTCGGCGGCGAGGTTACGATACCGTTCAAAGCGCGGATCGTGTCCGCTACCCATCGCGACCTGGCCGGGGCGTCCTCCACGGCGTTCCGGGACGACCTCTATTTCCGCCTGGCGGTCCTTCCAGTCGAGATTCCCCCTCTGAGACGGCGGCACGAGGACATCCTGTGGCTCATGGACCACTTCCTGAACAACGCCGTCGATCGGCTCGATTCCACCATCAGGGGCTTCAGCGCCTTGGCCGAGGAGGCGGCGCTGGCTTATCCCTGGCCCGGCAACGTCCGCGAACTCAGGAACAGGGTGGAGCGCGCCGTCGTTCTCGCCGGGGCCGAGTGGATCATGCCGGGTGACCTGTTTCCGGAACAGTTCGGAAAGTCGACGGCTGAAGATTTTGTCCCTCTTTCGATGGTCAGGGATGCCGCGGAGCGACGACAGATTGAACGGGCGCTGGAAAGAAGTGGCGGCAAAACGACGACGGCGGCCAGGCTGTTGGCAGTTTCACGGACCACACTGTGGGAGAAGATGACACGTCTCGGACTGTTGCCGCCGGAAAAAAGCTGA
PROTEIN sequence
Length: 443
MLHERGIGLVEDDPVMGGSLVQRLELEGWKVNWWQTGRAAMTELPATAGSLDLVVCDIKLPDVSGEEVFRQLAREPGMPPFLFVTGFGDIDQAVRLMRAGAADFLTKPFEMEAFLKRIEAGRRLSAGSGPAAHTLGESPAIRNVEDVLRQYARHELPVLVTGETGSGKEVAARLLHQISGRAAEPFVAVNCAAIPADLMESEIFGHEKGAFTSAQARHLGYAERAGKGTLFLDEIGDMPLSLQAKLLRLAEDGTFTRVGGEVTIPFKARIVSATHRDLAGASSTAFRDDLYFRLAVLPVEIPPLRRRHEDILWLMDHFLNNAVDRLDSTIRGFSALAEEAALAYPWPGNVRELRNRVERAVVLAGAEWIMPGDLFPEQFGKSTAEDFVPLSMVRDAAERRQIERALERSGGKTTTAARLLAVSRTTLWEKMTRLGLLPPEKS*