ggKbase home page

SCN18_30_10_14_R2_B_scaffold_7172_5

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 4664..5380

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease {ECO:0000313|EMBL:KAJ32573.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 211.0
  • Bit_score: 243
  • Evalue 2.90e-61
Putative ABC spermidine/putrescine transporter permease protein id=4565336 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 217.0
  • Bit_score: 192
  • Evalue 3.20e-46
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 212.0
  • Bit_score: 187
  • Evalue 3.80e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGACGGCCAAACAAGATATCCATGCTCTCTCCCCGTCCACTCCGGCGCGGGGATCCGGCTGGTCCAGCCTCGCCCCTTACTACGGCCTGGCGCCGCTCGCCGCCTTTCTGCTCCTCTTCTTTGTAGGGCCTCTTCTTCTTAATTTCGCGGAAAGCCTCGGACTGACACGGGGAGTTGTCGATCCTTCCGCATATGTCCGGATTTTTACCGACCTCTACTACATCAAAGTCATAGCCGCCACGCTCCTGCTGGGAGCCGTGGTCACGGTGGTCTGCGCCATCCTTGGCTATCCTCTTGCTTATGCGATAGCGCGAACCAGCGGCCTTTCGAAAAGCCTCCTGATCTTCGCGATTGTCATTCCGCTACTGGTGAACGTCGTCGTCCGCTCGTTCGGATGGATGGTGCTTCTAAGCGGCAGGGGCGCAATAAACTGGGCGCTCGCCGTCCTAGGACTTCCGACACTTGACCTGATGTACAACTGGGTCGGCGTTACGATCGCACTCGTTCACGTATTGCTTCCTTTCATGGTGTTGTCGCTGGCCAGCACCTTGGAAACGCTCGATTTACGGCTGGAAGAAGCCGCAGCTGTTTTGGGCGCGAGCAGGTCAAACATCTTCTTCCGGATCATTCTTCCGCTTAGCATGGAAGGCCTTGTGACAGGATCGATCCTTGTCTTCACGTTGTGCGTCGGAAGCTTTGTTACCGTCATGCTGCTG
PROTEIN sequence
Length: 239
MTAKQDIHALSPSTPARGSGWSSLAPYYGLAPLAAFLLLFFVGPLLLNFAESLGLTRGVVDPSAYVRIFTDLYYIKVIAATLLLGAVVTVVCAILGYPLAYAIARTSGLSKSLLIFAIVIPLLVNVVVRSFGWMVLLSGRGAINWALAVLGLPTLDLMYNWVGVTIALVHVLLPFMVLSLASTLETLDLRLEEAAAVLGASRSNIFFRIILPLSMEGLVTGSILVFTLCVGSFVTVMLL