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SCN18_30_10_14_R2_B_scaffold_15943_1

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(3..182)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D44441 similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 60.0
  • Bit_score: 90
  • Evalue 3.30e-16
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:EHK55790.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 60.0
  • Bit_score: 88
  • Evalue 2.30e-15
TRAP-type C4-dicarboxylate transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 58.0
  • Bit_score: 68
  • Evalue 4.90e-10

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
ATGAAACTCAACCTGACACGCAGGCAGACGCTCGTAGCAGGCGGCCTTCTGGCAGCTTCGACCGCGCTTCCGGCGCTCGCGGCGGACAAGCCGAAACTGCGCTTCTCGGCCGTGTTCTCCGACCAGGACATCCGCGCCGAGATGATGAAGAAATTCGCCGACTCGATAAAGGACGACTTC
PROTEIN sequence
Length: 60
MKLNLTRRQTLVAGGLLAASTALPALAADKPKLRFSAVFSDQDIRAEMMKKFADSIKDDF