ggKbase home page

SCN18_30_10_14_R3_B_scaffold_297_22

Organism: SCN18_30_10_14_R3_B_SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34_56_13

near complete RP 45 / 55 MC: 2 BSCG 47 / 51 ASCG 13 / 38
Location: 25774..26676

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 286.0
  • Bit_score: 395
  • Evalue 4.40e-107
Pseudouridine synthase n=1 Tax=Catellicoccus marimammalium M35/04/3 RepID=K8ZB62_9ENTE similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 280.0
  • Bit_score: 255
  • Evalue 3.80e-65
pseudouridine synthase, RluA family similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 286.0
  • Bit_score: 395
  • Evalue 8.80e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → Bacteria

Sequences

DNA sequence
Length: 903
GTGAAGTTAGTGGCAGATCAATTCGAGCGTTTGGACAAGTTCTTGGCAAAGGAGTTTCCTGACCACAGTCGCACCAAACTCGTGAAGTTGATCGACGATGGCGTTGTGAGGGTCGATGGCAAGGTCGCTAAACCCTCCTTCAAGTTAGAACCGGGAATGAGCGTTGAACTCCCCGAGCCCCAAGAGACGGTCGCCCATGACCTGACGCCAGCCGACATTCCACTTGAAATCGTCTTCGAAGACGAGCATCTGTTGGTTGTCAACAAGCCAAGGGGATTAGCCGCTCACCCTGCCGCATCGCTCAAAGAACCTTCGCTCGTGAACGCCTTGCTTGCTCGATCTCACGAACTGAGCCAAACTGCCGGAGCTTTTCGACCCGGAATCGTTCACCGACTGGACAAGGACACCACTGGCTTGATGGTGGTAGCTAAGACAGATCAAGCTCATGCGTTCTTGGCCAAACAGATTGAAACAAAGACCGCCGAGCGCCGATACTTGGCGGTGGTGGCGGGCGAGGTGGAGCAAGAGAGATTCAAGATCGACGCTCCCATCGCACGAGATCAACGAAACCGACTGAAGATGGCGGTCGATATGAAGGGGAGACCTGCCTTGACCCATGTTCATCAGTTTGCCAGAGTCCAAGCGGGCTTTTTGCTCGGAGTTAAGCTGGAGACCGGAAGAACCCACCAGATTCGCGTGCATCTCAGTTCCATTGGCCATCCCGTGCTCGGCGATACCATCTACGCGCCCAAGGCCTATCAAGAAGGGCCCCTTCAACTCCACGCGGCAATGCTGGCGTTTGACCATCCCGTCTCAGGCGAGAGAATCAACTGCTACGCTCCACCTCCCCGTGATTTCGACGATGGTGGAGGAGACTGGAAGGAACCGCTCGCCGCGATTTAG
PROTEIN sequence
Length: 301
VKLVADQFERLDKFLAKEFPDHSRTKLVKLIDDGVVRVDGKVAKPSFKLEPGMSVELPEPQETVAHDLTPADIPLEIVFEDEHLLVVNKPRGLAAHPAASLKEPSLVNALLARSHELSQTAGAFRPGIVHRLDKDTTGLMVVAKTDQAHAFLAKQIETKTAERRYLAVVAGEVEQERFKIDAPIARDQRNRLKMAVDMKGRPALTHVHQFARVQAGFLLGVKLETGRTHQIRVHLSSIGHPVLGDTIYAPKAYQEGPLQLHAAMLAFDHPVSGERINCYAPPPRDFDDGGGDWKEPLAAI*