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SCN18_30_10_14_R5_P_scaffold_3970_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(508..1119)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XFJ7_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 198.0
  • Bit_score: 283
  • Evalue 1.20e-73
Putative transmembrane protein {ECO:0000313|EMBL:CDX53603.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 199.0
  • Bit_score: 310
  • Evalue 1.20e-81
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 198.0
  • Bit_score: 283
  • Evalue 3.30e-74

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGGACGTTGTACTTAGTGACAGGCATGGCCTGCATGAGGACGCGCTGGCACTTGTCCTCGGCACGCTTTTGGTCGCGCTCGGAACGGTGATCTATGCCAAGGCGGTGCTGCTGGTCGGCGGCATGGCCGGGCTTGCGCTGCTGATGCAATACACGACCGGCGTCGATTTCTGGCTCGGCTTTTCGCTCATCAACCTGCCATTTTACTACCTTGGCCTGAAGCGGATGGGCTGGCGCTTTACATTGCGGACGTTTGTGGCCGTGACGCTGGTGTCGTTGTTTTCACGCCTGACGGCCGACTGGATCGACTTCTCGCGACTTGAACCGGCCTATGCGGCGGTCATGGCCGGTACGCTGTGCGGCACCGGCCTTTTGATGCTGTTTCGCCATCGAACTGGCCTTGGCGGCGTCAACATCCTGGCGATGTTCCTGCAGGACAATTGGGGCGTTCGCGCCGGCTATTTCCAGCTTGCGGTCGACCTTTGCATCCTGGGAGCAGCGATTTTCGTGCTGAGTCCGGATCGCATTGCGCTGTCAGTGGTGAGCGCGGTGATCCTCAATCTCATCATCGCCGTCAACCACCGTCCAGGCCGCTATCTCGGCATAAGCTGA
PROTEIN sequence
Length: 204
MDVVLSDRHGLHEDALALVLGTLLVALGTVIYAKAVLLVGGMAGLALLMQYTTGVDFWLGFSLINLPFYYLGLKRMGWRFTLRTFVAVTLVSLFSRLTADWIDFSRLEPAYAAVMAGTLCGTGLLMLFRHRTGLGGVNILAMFLQDNWGVRAGYFQLAVDLCILGAAIFVLSPDRIALSVVSAVILNLIIAVNHRPGRYLGIS*