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scnpilot_p_inoc_sub60_scaffold_287_curated_6

Organism: scnpilot_dereplicated_Thiobacillus_6

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: 4478..6742

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 757.0
  • Bit_score: 1401
  • Evalue 0.0
RNAse R (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 757.0
  • Bit_score: 1401
  • Evalue 0.0
exoribonuclease R n=1 Tax=Thiobacillus denitrificans RepID=UPI000367B615 similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 761.0
  • Bit_score: 1439
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2265
ATGACTTCAAAAAAATCGCGCAGTCGCGCAAGCAAGCACAAAATCCCGGCGATTCGCCTGGCCGACCCGTTCTACGAACGTGAAACCGAGCGCTACGAGTCGCCGCTGCCGAGCCGCGAATACATCCTGCAGCTGCTGACCGAGGCGGGCTGTCCGGTCGACGCCGACGCCTTCGCCGAACAGTTGCACATCACCGACGACGAGTGGGATCTGTTCCAGCGCCGTCTCGGCGCGATGCAGCGCGACGGCCAGCTGATGCTCAACCGCAAGCGCCAGCTGTGCCTGCCGGACAAGCTCGACCTGATCAAGGGCCGTGTCGAAGGGCATCCCGACGGCTTCGGCTTCGTGGTGCCGGACGAGGGCGGCGACGACCTCTACCTGTCGCCCAAGGAAATGCACCGCGTGCTGCACGGCGACCGCGTGCTGGTGCGCGTGGCCGGCTTCGACCGGCGCGGGCGGCGCGAGGCCAAGATCGTCGAGGTGCTGGAGCACGTCAACAAGCTCGTCGTCGGTCGCTACTACCTCGAGGGTGGCGTCGGCTTCCTGATCGCGGAAAACCGCCGCATCAACCAGGACATCCTCGTCCCCGCCGAGCATGCCGGCGCCGCGCAGCCGGGCCAGGTGGTGACGGTGGAAATCCTCACCCAGCCCGGTGCGCACAACGAGGCGGTGGGGCGGGTGTCCGAGGTGCTGGGCAGCTTTACCGGCCCCGGCATGGAAATCGAGATCGCGCTGAGGAAGCACGACCTGCCCTACGTGTTCCCGCCGGAGGTCGAGGCGCAGGCATCCAAGCTGCCAAGCAAGGTGCTGAAAAAGGACCTGGCCGGCCGCGAGGACATCCGCCACCTGCCGCTCGTCACCATCGACGGCGAGACCGCGCGCGACTTCGACGACGCAGTGTACTGCGAGCCGCTTGGCCGCAGCGGCTTCCGCCTGGTGGTGGCGATCGCCGACGTCAGCCATTACGTGCAGCCCAGGGATGCGCTCGACAGCGAAGGCTTCAACCGCGGCAACTCGGTGTACTTCCCGCGCCGCGTCATTCCCATGCTGCCGGAGGCGCTGTCAAACGGCCTGTGTTCGCTCAACCCGGAAGTCGACCGCCTGTCGATGGTGTGCGACATGCGCATCACCACGGCGGGGTCGATCAAGGAATACCGCTTCTACCCGGCGGTGATCCATTCGCACGCACGCCTTACCTACAATCAGGTATGGGACTGGCTCTCCGGCGCAGCCAAGCCGGAGAAGAAGCAGGCCGCGCTGATGCCGCATTTGGAAGCGCTCGACAAATTGTTCCGCACCCTGCTGAAGGCACGCGCCAAGCGCGGCGCCATCGATTTCGGTTCGACCGAGACGCAGATCAATTTCGACGACCAGGGCAAGATCAAGGAGATCGTGCCGGTGATCCGCAACGACGCCCACCGCATCATCGAGGAATGCATGCTGGCGGCCAACGTCTGCGCGTCGGATTTCCTGCACGAGAACAGGCAGCCGGCGCTGTTCCGCGTTCACGAAGGCCCGACCGCGGAAAAGCTCGCTGCGCTGCGCGGCTTCCTCGCCGAGTTCGGCCTCGACCTCGGCGGCGGCGACAAGCCGCACGCCAAGGACTACGCCACGCTGCTCGACAAGATCAAGGACCGTCCCGACCATGGCCTGCTGCAGACCGTGATGCTGCGCTCGTTGAAACAGGCGATCTACAGCCCCGACAACAAGGGGCACTTCGGTCTCGCCTACGAGGCCTACACCCACTTCACCTCGCCGATCCGCCGCTATCCCGACCTGCTGGTGCATCGCGGCATCAAGGCGGTGCTGAACGGCGAGAAACTGCCCGCCAAGGGGCTGGCGGAAATCGGCCTGCACTGCTCGATGACCGAGCGCCGCGCCGACGATGCCACCCGCGACGTCGACGCCTGGCTGAAAACCTATTTCATGCGCGACCGCATCGGCGACGAGTACAACGGCACCGTCAGCGCGGTGACCAGCTTCGGCATATTCGTCGCGATCGACGAGATCTTCATCGAGGGGCTGGCCCACGTCTCCGAGCTCGGCCAGGATTACTTCCACTACGACCAGGCCAAGCACATGATGCTCGGCGAGCGCACCGGAAAAAAATATCGCCTGGGCGACCGCGTGCGCATCAAGGTGATGCGCGCCGACATCGAGACCAGCAAGATCGACTTCGCCCTGGTCGAAGTAGTCGAGACGGCGGAAGAGGTCGCCGCGCCGAAAAAGAGAACGGCCAAGGCCAAGGGTAGCAAGCAGAAATGA
PROTEIN sequence
Length: 755
MTSKKSRSRASKHKIPAIRLADPFYERETERYESPLPSREYILQLLTEAGCPVDADAFAEQLHITDDEWDLFQRRLGAMQRDGQLMLNRKRQLCLPDKLDLIKGRVEGHPDGFGFVVPDEGGDDLYLSPKEMHRVLHGDRVLVRVAGFDRRGRREAKIVEVLEHVNKLVVGRYYLEGGVGFLIAENRRINQDILVPAEHAGAAQPGQVVTVEILTQPGAHNEAVGRVSEVLGSFTGPGMEIEIALRKHDLPYVFPPEVEAQASKLPSKVLKKDLAGREDIRHLPLVTIDGETARDFDDAVYCEPLGRSGFRLVVAIADVSHYVQPRDALDSEGFNRGNSVYFPRRVIPMLPEALSNGLCSLNPEVDRLSMVCDMRITTAGSIKEYRFYPAVIHSHARLTYNQVWDWLSGAAKPEKKQAALMPHLEALDKLFRTLLKARAKRGAIDFGSTETQINFDDQGKIKEIVPVIRNDAHRIIEECMLAANVCASDFLHENRQPALFRVHEGPTAEKLAALRGFLAEFGLDLGGGDKPHAKDYATLLDKIKDRPDHGLLQTVMLRSLKQAIYSPDNKGHFGLAYEAYTHFTSPIRRYPDLLVHRGIKAVLNGEKLPAKGLAEIGLHCSMTERRADDATRDVDAWLKTYFMRDRIGDEYNGTVSAVTSFGIFVAIDEIFIEGLAHVSELGQDYFHYDQAKHMMLGERTGKKYRLGDRVRIKVMRADIETSKIDFALVEVVETAEEVAAPKKRTAKAKGSKQK*