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SCNpilot_cont_1000_bf_scaffold_20836_3

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: 1184..1870

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: DNA mismatch repair protein Mlh1 isoform X3 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C19CC8 similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 228.0
  • Bit_score: 175
  • Evalue 8.60e-41
Uncharacterized protein {ECO:0000313|Ensembl:ENSLAFP00000017121}; TaxID=9785 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta.;" source="Loxodonta africana (African elephant).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.4
  • Coverage: 228.0
  • Bit_score: 175
  • Evalue 1.20e-40
mlh1; MutL DNA mismatch repair protein; K08734 DNA mismatch repair protein MLH1 similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 228.0
  • Bit_score: 172
  • Evalue 1.80e-40

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Taxonomy

Loxodonta africana → Loxodonta → Proboscidea → Mammalia → Chordata → Metazoa

Sequences

DNA sequence
Length: 687
GTGTACCAGACAGTACTGCAGCGATTCTCGACGTTTGAATCGATTCGACTCGCTGTACCGGTCTCGATCCAACGCATCACCAAGCTCGCTCTCGACAGCAGCGAGAGCGGCTGGAGCGAGGAGGACGGCGACAAGGACAAGATCGCCCAGTGGCTCGCGAACGTGCTGCAGGAGCGCGCCGAGATGCTCAAGGAGTACTTTGGCATCGAGATCGCATCCGACGGCGCGCTCGTGCGGCTGCCTCAGATCATCGACAACTACGTGCCAGACATGCGATACCTGCCGCTCTTCATCCTACGCCTCGGTACCGAGGTCACATGGGATCAGGAGCAGGAGTGCTTCGAGTCGATCTCGCGCGAGCTGGCGACCTTCTACCAGCTGCATGCCGAGCGTGATACGGCTACGGCGCGCGGCTCCAATGCTCAATCGGCCCTCTCGACATCCAGCACCTCTAGTACCAGTGACACGACGTCTACATCATCATCATCGTCGACCTCGGCACCATCACGAGCTGCCCGCAGTACGGAGGCGTCGGCGCGAGCGTGGAGCATCGAGCACACGTTCTCTCCAGCACTGCGCGGCGTCGGAGCCGAGGCCTTCCTGCCACCGAGACGGCTGGCCAATGACGGCAGCATCGTGCAGATTGCATGCCTCGAGAAGCTGTACCACATCTTTGAACGATGTTGA
PROTEIN sequence
Length: 229
VYQTVLQRFSTFESIRLAVPVSIQRITKLALDSSESGWSEEDGDKDKIAQWLANVLQERAEMLKEYFGIEIASDGALVRLPQIIDNYVPDMRYLPLFILRLGTEVTWDQEQECFESISRELATFYQLHAERDTATARGSNAQSALSTSSTSSTSDTTSTSSSSSTSAPSRAARSTEASARAWSIEHTFSPALRGVGAEAFLPPRRLANDGSIVQIACLEKLYHIFERC*