ggKbase home page

SCNpilot_cont_1000_bf_scaffold_49139_1

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: 2..811

Top 3 Functional Annotations

Value Algorithm Source
Calcium-binding protein n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DV55_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 273.0
  • Bit_score: 280
  • Evalue 1.70e-72
IclR family transcriptional regulator {ECO:0000313|EMBL:KDM66098.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 270.0
  • Bit_score: 314
  • Evalue 2.00e-82
SMP-30/gluconolaconase/LRE domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 279.0
  • Bit_score: 280
  • Evalue 7.00e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidiphilium sp. JA12-A1 → Acidiphilium → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
GTCCAGGAGCAGCGGCTGTACTGGGTCGATTCCTACGCGAGGGCGGTTCGTTGCATGGACCCGCGCGGCGGAGATCCGCGAAGCTGGCAGGTGCCTGAGATCGTCGGCTCCCTTGCATTGCGCGCGGGCGGCGGCGCGGTCGTCGCCCTGCGTAGCGGGTTTTATTTCCTCGATTTTCGCACCGGTGGCGTCGATCGCATTCATTTGACACAGCCCGGCGAGCTTCGGGCGCGAATGAACGACGGCAAGGTCGACCGGCAGGGACGGTTCGTCGTCGGGTCGATGGACCACGAAAGCAGCGACCCGGTTGGCCGGATATTCCAGCTCGATACCGACCTTACGGTTCGCACGCTCGACACCGGATTCATCTGCTCCAACGGCCCTTGCTGGAGCCCGGACGGCAGGACGCTCTACCTGGCGGACACCCATCGGAAGGCCATCTATGCGTACGACTATGATCCCGAGACGGGAGAGGTGCGCGCGCGCCGCCGTTTTGCCGGCTTCGAGGGGCTGCGCGGTCCGCCGGACGGCGCGACGGTGGACGAAGAGGGCTATGTCTGGAGCGTCGAGGTCTTTTCGGGGCGGCTCATCCGCTTTGACCCGGAAGGAGTCGTGGATCGTATCGTCGGCCTGCCCGTCGCCTCCGCCACCAGCTTGACCTTCGGCGGTGCCGATCTCGATATCGCTTTCGTCACTTCAATGTCCCGGCCTATCCGCGGCGCCTATCCGTTGGAGCGAGAGGCGGGCTTGGTCTTCGCGGTCAAGGGTCTCGGGGTGAGAGGTATCCCGGAACCAAGATTTGCCGGATGA
PROTEIN sequence
Length: 270
VQEQRLYWVDSYARAVRCMDPRGGDPRSWQVPEIVGSLALRAGGGAVVALRSGFYFLDFRTGGVDRIHLTQPGELRARMNDGKVDRQGRFVVGSMDHESSDPVGRIFQLDTDLTVRTLDTGFICSNGPCWSPDGRTLYLADTHRKAIYAYDYDPETGEVRARRRFAGFEGLRGPPDGATVDEEGYVWSVEVFSGRLIRFDPEGVVDRIVGLPVASATSLTFGGADLDIAFVTSMSRPIRGAYPLEREAGLVFAVKGLGVRGIPEPRFAG*