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SCNpilot_cont_1000_bf_scaffold_527_38

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: comp(37135..37602)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKY6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 155.0
  • Bit_score: 303
  • Evalue 1.10e-79
Transcription termination factor Rho {ECO:0000313|EMBL:EIL87877.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 155.0
  • Bit_score: 303
  • Evalue 1.50e-79
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 155.0
  • Bit_score: 300
  • Evalue 2.20e-79

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
CTCGACTCGATCACCCGCCTCGCCCGCGCCTACAACACCGTGGTGCCCAGCTCCGGCAAGGTGCTCACCGGCGGCGTGGACGCCAACGCGCTGCAGCGCCCGAAGCGCTTCTTCGGCGCCGCGCGCAACGTGGAGGAAGGCGGCAGCCTCACCATCATCGCCACCGCGCTGATCGACACCGGCAGCAAGATGGACGAGGTGATCTACGAGGAGTTCAAGGGCACCGGCAACATGGAAGTGCACCTGTCCCGCCGCATCTCCGAGAAGCGCGTCTACCCCGCCATCGACATCAACCGCTCCGGCACCCGCCGCGAGGACCTGCTGATCGAGCCGGACATGCTGGCGAAGATCTGGATCCTGCGGAAACTGCTGCACCCGATGGACGAGCTGGCCGCGATGGAGTTCATGCTCGACAAGATGAAGAACACCAAGTCGAACGACGAGTTCTTCAATTCGATGAAGCGCTGA
PROTEIN sequence
Length: 156
LDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMEVHLSRRISEKRVYPAIDINRSGTRREDLLIEPDMLAKIWILRKLLHPMDELAAMEFMLDKMKNTKSNDEFFNSMKR*