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SCNpilot_cont_1000_p_scaffold_906_29

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 29973..30800

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 275.0
  • Bit_score: 466
  • Evalue 3.20e-128
diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 275.0
  • Bit_score: 437
  • Evalue 2.70e-120
  • rbh
Diaminopimelate epimerase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI72_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 275.0
  • Bit_score: 466
  • Evalue 2.30e-128
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAAACTGAAATTCACGAAGATGCATGGGCTGGGGAACGATTTCGTCGTTATCGATGGCGTCAATCAATCTGTTTTGCTCGGCCCGGAACAAATGCGGCGGCTCGCCGATCGGCATTTCGGCGTGGGCTGCGATCAGATCCTGCTGATAGAGGCGGCAAGCGGCGATACGGATTTTCGCTATCGCATCTTCAACGCGGACGGCGGGGAAGTGGAGCAATGCGGTAATGGCGCACGCTGCTTCGTGCGCTATGTGCACGATTATGGGATGACGAGCAAGGACGAGATCCGCGTGGAGACGCTTGGCGGCCTCATCATCCCCCGGCTGGAGCCCGGTGGCGAAGTGACGGTCAACATGGGCGAACCGGGATTCGAACCGGAGGATATTCCTTTCCTTGCCGCAAAGCGCGCCATGACTTATCCGCTCGACATCGGCGGCGGGGAGATTGAAATCAGCGTCGTGTCGATGGGGAACCCTCACGCCGTGCAATTGGTGGAGGATGTGGATCAGGCGCCGGTATCGACCGAAGGCCCGCTGATCGAACGCCATCCGCGCTTTCCTCGCCGGGTGAATGCCGGCTACATGCAGGTCCTTGATCGCCGCCACATACGGCTGCGAGTATATGAACGAGGCGCGGGAGAAACGCTTGCATGCGGCACCGGCGCTTGCGCCGCGGTAGTCGCTGGAATCCGGCGCGGCTTGCTGGATTCGTCGGTTGAAGTCAGCCTGCGAGGCGGCAAGCTGCGCGTGCGTTGGGCAGGCGAAACCCAGCCCGTCTGGATGACCGGCCCCGCCGTAACCGTGTTCGATGGAGAAATCGAGTTATGA
PROTEIN sequence
Length: 276
MKLKFTKMHGLGNDFVVIDGVNQSVLLGPEQMRRLADRHFGVGCDQILLIEAASGDTDFRYRIFNADGGEVEQCGNGARCFVRYVHDYGMTSKDEIRVETLGGLIIPRLEPGGEVTVNMGEPGFEPEDIPFLAAKRAMTYPLDIGGGEIEISVVSMGNPHAVQLVEDVDQAPVSTEGPLIERHPRFPRRVNAGYMQVLDRRHIRLRVYERGAGETLACGTGACAAVVAGIRRGLLDSSVEVSLRGGKLRVRWAGETQPVWMTGPAVTVFDGEIEL*