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SCNpilot_cont_1000_p_scaffold_1741_15

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 17425..18885

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:KIO49363.1}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 486.0
  • Bit_score: 613
  • Evalue 2.80e-172
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 470.0
  • Bit_score: 528
  • Evalue 2.10e-147
  • rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLG1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 485.0
  • Bit_score: 602
  • Evalue 3.60e-169
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
ATGATGACGGTGCGGCAAGCGGCTCATGCCCTGCATGCGGAATCGAGCGGCCAGGATGTTTCCTTCACCGCCGTGAGTACCGATAGCCGGACGATCGGCCGGGGTAATCTGTTCGTGGCCCTGACAGGCGAAAAATTCGATGGCCATGATTATCTGCCGGAAGTACAGCAAAAGGGCGCTTCCGCCGCCCTGGTTCGACAGGATTGCGCGGCCAGCAAGGGCGCCGGCATTCCCCTGATCCTGGTGAAGGATCCTCGCCTTGCGCTGGGGCAGTTGGCGAAGTACTGGCGTGATCGCTTTGCCATTCCGGTGGTGGCGGTTACCGGCAGCAATGGCAAGACGACGGTCAAGGAAATGCTTGCGTCCATTCTGCAACAGGCGGCGCAGCGCGGACAACGCACACCTGGTCCCGAGCGAGTGCTGTTTACCGAGGGCAACCTCAATAATGACATCGGTGTCCCCCTGACGCTTTTGCGGATGCGCGAGCAGCATGTGTACGCCGTAATCGAAATGGGTATGAATCATTCTGGAGAAATTGCCTACTTGAGCCGGCTGACAAGGCCGAGCGTGGCGGTGATTACCAATGCGGGCATGGCGCATACTCGCGACCTCGGTTCAGTGGAAGCGGTTGCTTATGCCAAAGGTGAAATTTTTGAAGGGCTTGACGAGCAGGGTATCGCAGTCATCAACGCGGACGACTCCTATGCGCCGCTGTGGCGCAAATTGGCCGCAGGGGTGGATGAGGGCGCCAGGGGCGGCAGAGCCAAAGGAGGTGAAAGGGACGGAAAGAGCAGAAAGATACTCGAATTCGGGTTGGGTGGAAAGCCAGCGGTAAGCGCCCGCTACCAGCTCGATCCGCTTGATCCGCACCACTCCCCGCTCGATTCTCCAGGCAGCAGAATGAGTCTGCTGCTGCCGGCATGCACGGAGGAGGTTGAGTTGCAGGTGCCGGGAGTGCACAACATATGCAACGCGCTGGCGGCGGCAGCAGCAGCGGTAGCGATGGGTATCGAAGGGAAAGTCATAGCTGCGGGATTGAGCCAGTTCCGCGGAGTGAAGGGACGCATGCAGAGAAAGTACGGCTTGCATGGATCGATCCTGATAGATGATAGCTACAACGCGAACCCGGAATCGGTGAAGGCAGGATTGGCCGTTCTGGCAAAGGCTGACGGAAAAAAGATCATGGTGCTTGGGGACATGGGCGAGCTGGGCGACAGCGCGAGAGATGCGCATGCCCGCATTGGTGCCGAGGCACGGTTCTCGGGTATCGACAAGTTGTTCGCCCTGGGCGAATTCAGCGCATATGCCGTGGACCAGTTCGGACCGGGGGCGAAACACTTCGATGAAATCGAGGGGTTGCTGGCGGAGGTGGAAAGCGAGTTGACGCCCGATACGACCGTGCTGATAAAGGGATCACGGTTCATGCGAATGGAACGGGTCGCAGCCCGTTTTGAACAGTGA
PROTEIN sequence
Length: 487
MMTVRQAAHALHAESSGQDVSFTAVSTDSRTIGRGNLFVALTGEKFDGHDYLPEVQQKGASAALVRQDCAASKGAGIPLILVKDPRLALGQLAKYWRDRFAIPVVAVTGSNGKTTVKEMLASILQQAAQRGQRTPGPERVLFTEGNLNNDIGVPLTLLRMREQHVYAVIEMGMNHSGEIAYLSRLTRPSVAVITNAGMAHTRDLGSVEAVAYAKGEIFEGLDEQGIAVINADDSYAPLWRKLAAGVDEGARGGRAKGGERDGKSRKILEFGLGGKPAVSARYQLDPLDPHHSPLDSPGSRMSLLLPACTEEVELQVPGVHNICNALAAAAAAVAMGIEGKVIAAGLSQFRGVKGRMQRKYGLHGSILIDDSYNANPESVKAGLAVLAKADGKKIMVLGDMGELGDSARDAHARIGAEARFSGIDKLFALGEFSAYAVDQFGPGAKHFDEIEGLLAEVESELTPDTTVLIKGSRFMRMERVAARFEQ*