ggKbase home page

SCNpilot_cont_1000_p_scaffold_3032_4

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(1792..2343)

Top 3 Functional Annotations

Value Algorithm Source
InterPro IPR000063 COGs COG0526 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGF1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 159.0
  • Bit_score: 238
  • Evalue 6.70e-60
Signal peptide protein {ECO:0000313|EMBL:KIO50092.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 159.0
  • Bit_score: 241
  • Evalue 8.40e-61
signal peptide protein similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 174.0
  • Bit_score: 222
  • Evalue 9.10e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGAATAAAAAAACCGGTTTCGAATTCTCCGCAGCGCTTCCGGGATTTCCATTGAAAGCCGCATTGCGTTGCCTGACGCTCGCGCTGGCGCTGGTTTGCATCAGCCCTGCCAGCGCCATGGAAAGTGTGCGGCCTTTTGCCGCCGGCAGTTTTTCCCAGGTTCTCGCAGCCCGCCAGGGCAAGCCCTTTATTCTCGTTCTGTGGTCGCTTGACTGCCAGTATTGCCCAACGGAATTAAAGACTCTGAGTGAACTCAGGCGCAGCCATCCCCAGCTGGATGTCGTGCTGGTATCCACGGATACAGTGGGCGATGGACCGCAACTCGTGGCGCGAACGGAAAGCTATGGCCTGAAAAAGATCGAGCAGTGGGTCTTCGCGGAGGATGTTCCGGAACGTTTGCGGCTCGAAATTGACGGCCGCTGGTACGGAGAAGTTCCCCGCACCTATTTTTTTGATCAGAGGCACCAGCGCGAGGTCAAGAGCGGCTTGGTAAACAAGAAGATTTTCGAAGACTGGCTTTCCCGGAACATGCCCTCGGGTTCCGGTCATTAA
PROTEIN sequence
Length: 184
MNKKTGFEFSAALPGFPLKAALRCLTLALALVCISPASAMESVRPFAAGSFSQVLAARQGKPFILVLWSLDCQYCPTELKTLSELRRSHPQLDVVLVSTDTVGDGPQLVARTESYGLKKIEQWVFAEDVPERLRLEIDGRWYGEVPRTYFFDQRHQREVKSGLVNKKIFEDWLSRNMPSGSGH*