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SCNpilot_cont_1000_p_scaffold_6916_2

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(1310..3154)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 614.0
  • Bit_score: 1107
  • Evalue 0.0
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 612.0
  • Bit_score: 1089
  • Evalue 0.0
  • rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=DXS_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 612.0
  • Bit_score: 1089
  • Evalue 0.0
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1845
ATGTATCCACTGCTTGACACCATCATCACCCCTTCAAAATTGCGGGCGCTGGAACGCAGGATGTTGCCGCAGCTTGCCGACGAGTTGCGCCAGTTCCTGGTTGAATCGGTTGCCAGGACAGGTGGCCACCTGTCTTCGAACCTGGGCACCGTAGAGCTGACGATCGCGTTGCACTATGTATTCAACACGCCCCATGATCGCCTGGTATGGGACGTTGGACATCAGACCTATGCGCACAAAATATTGACCGGGCGCCGCGAAGGCATGAAAAAATTGCGCATGCATGGCGGAATCGCTGGATTTCCGCGGCGCGATGAAAGCGAATACGATGCTTTCGGCACGGCGCATTCCAGTACTTCCATCAGTGCCGCTCTCGGGATGGCTGTCGCCTCGCAGCAGGAAGGAAAGAGCAGACGCGTGGTGGCCGTGATCGGCGATGGCGCGATGAGTGCGGGGATGGCGTTCGAGGCATTGAACAACGCCGGAGCGATGACCACCGATCTGCTGGTGATCCTGAATGATAACGACATGTCCATCTCGCGCCCCGTTGGCGCTCTCAACAATTACCTCGCAAGACTCATGTCCGGGCAATTCTACGCCACCGCACGCCGTGCCGGAGAAAAGATGCTGGGAGTCGTGCCCCCTGTGCTGGAACTGGCCAAGCGCGCCGAAGAGCATGTCAAAGGCATGGTGACGCCCAGCACGATGTTCGAGGAGTTCGGATTTAATTATATCGGGCCTATCGATGGCCATGACCTCGATGTGCTGGTAAGCACACTCAACAATATCAAACACCTGGATGGTCCGCAATTCCTTCACGTGGTGACGCGCAAGGGCGCTGGCTACAAAGCCGCGGAGGACGATCCCATTCTTTATCACGGCGTGGCCAAGTTTAACCCCGATGCCGGCATTCTGCCCAAAGGCGGCGGCAAGCCGTCATATACCCAGATTTTTGGCGACTGGTTATGCGACATGGCGGCATTGGACCAGCGCTTGGTCGGGATCACCCCGGCAATGCGGGAGGGCTCGGGACTCGTGAAATTCTCCGAAGAGTACCCTGATCGATATTTCGACGTAGGTATCGCCGAGCAGCATGCCGTAACTTTTGCCGCGGGCCTTGCTTGCGACGGCATCAAGCCGGTTGTCGCCATTTATTCCACTTTCCTGCAACGGGCCTACGATCAGTTGATTCATGATGTCGCAATACAGAATCTTCCGGTCGTGTTCGCCATCGATCGGGCGGGGTTGGTGGGAGCGGACGGTCCTACCCATGCAGGCAGCTTTGATTTGACTTACCTGCGATGCATACCGAATATGACCGTTCTGGTTCCTGCCGATGAAAATGAATGCCGCCAGATGCTTTATACCGCATTCCAGCTGGATACACCGACGGCCGTGCGGTATCCGCGCGGTGCGGGTACCGGCGTTGCCCCGGAAAAGCAGATGCATATGCTGCCTGTCGGGCGGGGCGAAGTTCGCCGGACCGGCGAAAAAATAGCGTTACTGGCTTTTGGCAGCATGCTCAAACCGTGTCTTGAAGCAGCGGAGGAATTGAATGCCACCGTCGTCAATATGCGTTTTGTCAAGCCACTGGATGGTGATCTGGTTGCGTCCCTCGCGCAGAAATATGAATTATTGGTAACCGTGGAAGAAAATACGATCATGGGCGGAGCAGGCAGCGCAGTGCTCGAATCGCTTTCAAGCCGGGGATTTACCGTTCCTGTGCTGCAGCTTGGCCTGCCGGATACTTTCATCGACCAGGGCGATCCAGCCCAGATGCTGGCTGATTGCGGGCTGGACAGCACGGGGATTATCACATCAGTCCGGGCCAGGCTCTTCGACTAG
PROTEIN sequence
Length: 615
MYPLLDTIITPSKLRALERRMLPQLADELRQFLVESVARTGGHLSSNLGTVELTIALHYVFNTPHDRLVWDVGHQTYAHKILTGRREGMKKLRMHGGIAGFPRRDESEYDAFGTAHSSTSISAALGMAVASQQEGKSRRVVAVIGDGAMSAGMAFEALNNAGAMTTDLLVILNDNDMSISRPVGALNNYLARLMSGQFYATARRAGEKMLGVVPPVLELAKRAEEHVKGMVTPSTMFEEFGFNYIGPIDGHDLDVLVSTLNNIKHLDGPQFLHVVTRKGAGYKAAEDDPILYHGVAKFNPDAGILPKGGGKPSYTQIFGDWLCDMAALDQRLVGITPAMREGSGLVKFSEEYPDRYFDVGIAEQHAVTFAAGLACDGIKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLTYLRCIPNMTVLVPADENECRQMLYTAFQLDTPTAVRYPRGAGTGVAPEKQMHMLPVGRGEVRRTGEKIALLAFGSMLKPCLEAAEELNATVVNMRFVKPLDGDLVASLAQKYELLVTVEENTIMGGAGSAVLESLSSRGFTVPVLQLGLPDTFIDQGDPAQMLADCGLDSTGIITSVRARLFD*