ggKbase home page

SCNpilot_cont_1000_p_scaffold_8073_3

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 1770..2852

Top 3 Functional Annotations

Value Algorithm Source
Recombination protein MgsA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCN4_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 357.0
  • Bit_score: 567
  • Evalue 1.20e-158
Recombination factor protein RarA {ECO:0000313|EMBL:KIO47981.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 356.0
  • Bit_score: 568
  • Evalue 7.70e-159
recombination factor protein RarA; K07478 putative ATPase similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 357.0
  • Bit_score: 567
  • Evalue 3.90e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
TTGAAGCCGGCAAGCCGCTCCGGCGTGAAGGATATCCGTGAGGCAGTGGAACGCGCCCAGGCTATCCTGCAGCAATCCGGGCGGCACACCATCCTGTTTGTCGACGAGGTGCACCGCTTCAATAAATCCCAGCAGGATGCGTTCCTGCCCTATGTCGAACAAGGGTTGGTGACATTTGTCGGCGCTACTACCGAAAACCCTTCGTTTGAAGTGAATGGCGCATTGTTGTCGCGTGCGCAAGTGTATGTGCTCAACCCGCTGTCGGACGATGAGCTCGGGATCGTGTTCGAGCGTGCGCGCAATCTTGCGCTGCCGGACCTGGATTTCACGGGGGATGCGAAACGCCTGTTGATCGGGTACGCTGACGGCGATGCTCGTCGCCTGCTCAATTTTCTCGAGCAGATAAAAACGGCGGCGGCAACCGAAGGCATTGCCGCAATAGACAGGGAGTATGCGCAAGCTGCGCTCTCTCCCGGCGGGCGCCGCTTCGACAAGGGAGGTGACAACTTCTATGACCAGATTTCCGCCCTGCACAAATCGGTTCGCGGCTCCAATCCGGATGCCGCGCTTTACTGGACATGCCGGATGCTCGACGCGGGAGCCGATCCGCGTTACATCGCGCGCCGTCTCATTCGCGCCGCGGCGGAAGACATCGGCCTGGCTGATCCCCGCGCACTGCAGATCGCATTGAACGCAAGCGAAACTTATGAGCGCCTCGGCAGTCCCGAAGGGGAACTGGCGCTCGCGCAGGCAGCCCTGTATCTTGCTTGCGCTCCCAAGAGCAATGCCGCCTATCTTGCGTATAATGAAGCGAGAGCTTTCATAGCTGGCGACAAGTCGCGGCCTGTCCCGGAACATTTGCGAAACGCACCCACCCGGCTGATGAAGGAGCTGGGTTTCGGGCATGGCTACCGGTATGTGCATGACGAACCTGAAGCATACGCCGCCGGAGAGGATTATTTGCCTGAAGGAATGCCGCAGGTCCGGTTTTATCGACCTGCTCCGTACGGTCTTGAGAAAAAAATCGCGGAAAGACTGGACCATCTGCGCGAACTGGACGAACAGGCAAAGAAGCAATCATAG
PROTEIN sequence
Length: 361
LKPASRSGVKDIREAVERAQAILQQSGRHTILFVDEVHRFNKSQQDAFLPYVEQGLVTFVGATTENPSFEVNGALLSRAQVYVLNPLSDDELGIVFERARNLALPDLDFTGDAKRLLIGYADGDARRLLNFLEQIKTAAATEGIAAIDREYAQAALSPGGRRFDKGGDNFYDQISALHKSVRGSNPDAALYWTCRMLDAGADPRYIARRLIRAAAEDIGLADPRALQIALNASETYERLGSPEGELALAQAALYLACAPKSNAAYLAYNEARAFIAGDKSRPVPEHLRNAPTRLMKELGFGHGYRYVHDEPEAYAAGEDYLPEGMPQVRFYRPAPYGLEKKIAERLDHLRELDEQAKKQS*