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SCNpilot_cont_1000_p_scaffold_8197_1

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 54..1580

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis chain length determinant protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DM77_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 509.0
  • Bit_score: 883
  • Evalue 8.30e-254
  • rbh
Chain length-determining protein {ECO:0000313|EMBL:KIO49387.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 510.0
  • Bit_score: 888
  • Evalue 3.60e-255
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 510.0
  • Bit_score: 866
  • Evalue 5.70e-249
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1527
ATGGAGGAGTTGACTTCTCAACTGCTGGTTTATCTCAAGGGGGTATGGAAGTACCGTTGGGCTGCCGTCGCCACTGCCTGGGTCATAGCCATAGCAGGCTGGATCATAGTCTACAAGCTTCCGGATGATTATCAGGCATCGGCCAGAATTTATGTCGATACGCAAAATGTCCTGAAGCCGTTGATGGCGGGCATGACCATTTCTCCCGATTTGCAGCAGCAGGTTTCCATCATGAGCCGCACCTTGATTAGCCGGCCGAATGTGGAACGTGTGGTACGTATGGTGGATCTGGACATCAAGGTGAAGGACGTCAAGGACCAGGAACGCCTGGTCAAGGAATTAATGGATAAAATAAAGCTGGGGACGACAGGGCGCGACAACCTTTTTACCATTCATTACAATAATCAGAATCCCAGGCTGGCCAAGGATATAGTTCAATCCCTGTTAACGATATTCGTGGAAGGGGGCTTGGGCGACAAGAAACAGGACTCTTCTTCCGCAATCCGCTTTATTGATGAGCAAATACAGAGTTACGAGGAAAAACTCATAGCCGGCGAGAATAATCTCAAGGCATTCAAGCAAAAGAACATCGGCCTGATGCCTCAGCAAGGCAGCGATTATTATGCGCAGCTTTCGGCTGCTTCGGAAGATCTCAATAAAACCAGATTGGACTTGCGCGAGGCGGAACAGGCGCGCGACGCGATCAAGAGACAGATTACAGGCGACGAGCCGGTTCTCATGGTGGAACAGAACGATCCTGCGTCGATAGTCAACGTGGAGCTTGATTCACGGATAGAAGCATTGAATAAAAACCTCGACGCGCTCAGGCTCAACTTTACCGAATTGCATCCTGATATCATTTCGGCCAAGCGATTGATCGCTCAACTCGAGGACCGGAAAAAAGACGAAGCCAAGCTTGCAAGACCAAGCTCCGATCCCGGGAAGAACTATAGCCCAATGTTGCAGCAGTTGAACGTGGCGCTAGCGGAAGCGGAAGCCGACGTCGCATCCATGAGGGCTCGGGTCGAGGAATATACGTCGCGTTACGACAGGCTGAAATCGCTGAGCAATGCTGTTCCGCAAGTGGAGGCGGAGCTTGCGCAACTCAATCGCGATTACCAGGTGAATAAGTCCAATTACGAGAAGCTTCTTGAACGGCGGGAGTCTGCCAAAATATCGGGTGATCTGGGATCGGCAACTGAGTTGATGTCATTCAAGATCATCGATCCGCCGACCGTTCCTGATTTGCCAGTAGGACCCAACCGCAGCAAATTGTTTTCACTGGTATTCCTGGGGGCGCTGCTTGCGGGTATCGGGATGGCCTTCGTTGTGAGCCAGATAAGACCGACATTCCACAGCCAGAATAGCCTTCGTGAATTCACGGGCAGGCCGATACTGGGTTCAATTCCCATGATATGGACCGACAAGGAAAAAATAAAGCGCAGAAAGAAGCTTTATGCTTTCGGTTTGTCCTTATTATCGCTACTGGGATTGTACGGCGCGTTAATGGTCAGGATGGCCCATTAG
PROTEIN sequence
Length: 509
MEELTSQLLVYLKGVWKYRWAAVATAWVIAIAGWIIVYKLPDDYQASARIYVDTQNVLKPLMAGMTISPDLQQQVSIMSRTLISRPNVERVVRMVDLDIKVKDVKDQERLVKELMDKIKLGTTGRDNLFTIHYNNQNPRLAKDIVQSLLTIFVEGGLGDKKQDSSSAIRFIDEQIQSYEEKLIAGENNLKAFKQKNIGLMPQQGSDYYAQLSAASEDLNKTRLDLREAEQARDAIKRQITGDEPVLMVEQNDPASIVNVELDSRIEALNKNLDALRLNFTELHPDIISAKRLIAQLEDRKKDEAKLARPSSDPGKNYSPMLQQLNVALAEAEADVASMRARVEEYTSRYDRLKSLSNAVPQVEAELAQLNRDYQVNKSNYEKLLERRESAKISGDLGSATELMSFKIIDPPTVPDLPVGPNRSKLFSLVFLGALLAGIGMAFVVSQIRPTFHSQNSLREFTGRPILGSIPMIWTDKEKIKRRKKLYAFGLSLLSLLGLYGALMVRMAH*