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SCNpilot_cont_1000_p_scaffold_8801_10

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 8745..9071

Top 3 Functional Annotations

Value Algorithm Source
Glycolate dehydrogenase, FAD-binding subunit GlcE {ECO:0000313|EMBL:CCU61651.1}; EC=1.1.99.14 {ECO:0000313|EMBL:CCU61651.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 102.0
  • Bit_score: 114
  • Evalue 7.10e-23
Glycolate dehydrogenase, FAD-binding subunit GlcE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF96_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 102.0
  • Bit_score: 114
  • Evalue 5.00e-23
glcE; glycolate oxidase FAD binding subunit; K11472 glycolate oxidase FAD binding subunit similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 102.0
  • Bit_score: 110
  • Evalue 3.00e-22

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGCAGCCTGTCATCGACGAGTTTACTCATGCTATTCGCCTGTCTGCGGAAAACAGGGCTCCCTTGCTCATACGTGGCGGAGGAAGCAAGGATTTTTACGGCAACCTCGGCGGCGCAACAGGCAGAACAGGAGAAAGCATCCTGGAAACCGGCGTTTATAGCGGCACCGTGGATTATGAGCCTACGGAGCTGGTCGTCACGGTTCGCGCGGGCACCCGTCTTGCCGATCTCGAAAGGGAATTGAACGGCTGCCATCAAATGCTGTCTTTCGAGCCCCCGCACTTCAGTTCCAATACGACCATAGGGATGGCAAAGGCAAGGATCTGA
PROTEIN sequence
Length: 109
MQPVIDEFTHAIRLSAENRAPLLIRGGGSKDFYGNLGGATGRTGESILETGVYSGTVDYEPTELVVTVRAGTRLADLERELNGCHQMLSFEPPHFSSNTTIGMAKARI*