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SCNpilot_cont_1000_p_scaffold_17963_5

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(2911..4644)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 554.0
  • Bit_score: 635
  • Evalue 1.40e-179
  • rbh
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKU9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 554.0
  • Bit_score: 754
  • Evalue 8.70e-215
  • rbh
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 554.0
  • Bit_score: 754
  • Evalue 1.20e-214

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1734
ATGCTGAATTTTCGCGCAGACATCGAGTGGGTGAACGGGCAACCGTTTTCGCGCCGCTACGGCGATATCTATTTCTCGAGAGAGGGAGGGCTGGCGGAGAAACGCCACGTCTTTTTGGATGGCAATAACCTTCGGGAACGTTTTGCCTCACTGGGGTGCAGGCAGACATTCACCATAGGCGAGACAGGCTTTGGCATAGGCCTTAATTTCCTGTGCGCACGACAATTATTCGAAGAAACCGCCAACGCAGGCAGTAGCCTCGACTATTTCAGCGTGGAGAAATACCCGCTGGATGAGCGCGAACTGGAACAGGCACTCGCGCCATGGCCGGAATTTCGACGATACGCCGTGGAATTGATCCAGCGCTGGCGTCGCCGCGTCCCTGGCTGGAACCGGTGGAGTTTTGCAAATGGCCGTGTCCGGCTCACGCTGGTGATCGATGATGCGCTGACGGCGCTGCCCGAAGCTTCCGCGTCTGTCGATGCCTGGTTTCTCGACGGATTTGCCCCCTCGCATAATCCTGAGCTCTGGACGCAACCCGTGTGCGAGAGCATCGTATCCGCCTCGAGGTCCGGCACCACTTTTTCCACCTATACCTGTACCGGCTGGGTGCGGCGCAGCCTGGAAAAGGCCGGCTTCCAGGTCGACAAGGCTCCGGGCTTCGGCCGCAAACGCGAAATGCTCCGGGGATGTCTGCCTGGGGCAGCGAATCCCTCATCGCCTCCGGCGACAGCCATTGTAATCGGCGCGGGCCTCGCGGGTTGCAGCGTGGCTTCCGCCCTGGCGGCCCGCGGCGTTGCCGTATCGCTCATCGAGCAGGCGCCGCGCCTTGCGGCCGGCGCCTCCGGAAATTCCCTGGGCATCCTCCATGCCCGCCTGAGTGCGGGAATGAGCCCGCTGCAGCGCTTCGTTCTTGCCTCGTACGGATATGCTCTTGCCTTGCTCGACGAAAAGCTGCCCGTGGACGGGATTGCACGCGCGGAATGCGGAGAATTGCAGCTTGCCTTCTCGGATGACGAAACCAAGCGTATCGACAAACTGGCAGCGCTTGATTGGCCCCCGCACATCTTGCAATATGTCGGGCCGGCAGACGCATCGAACCTGGCTAGCCTAAAGCTCGCACATGGCGGCTTGTGGTTCCCTGCAGGAGGATGGGTCGTACCGGCAAGCGTGTGCGAGGTGCTGGCGGCTGATCCCCGGATCACGCAACGGCTGGGCTGCAGCGCAGATTCGCTGGCCTGGAAAAAAGATACCGATGCAGGATGGCATGTGGCAGGCCAGGATCAAAATGGACAATCCTGGGAGCAAGCCGCTCAGATAGTGGCGGTTTGCACGAGTTACCAGGTGAAGAACTTCGAACCGCTGGCAGACTTTCCGCTGACGCCGGTCAGGGGACAGATTACCGCGCTGCCCGTCACGCCACCCAGCAAAAATTTGCGCACTATTGTGAGCGCTCGCGCTTACCTGTCTCCCGGGGTTGCGGGCACACATGTGGCCGGCGCCACGCATGGCTTCAACGATGTGTCGCTCGAACTGCGAACCTGCGATCACCTGGAAAACCTGCACAAGCTCTCCGAAATCTCTCCGGCCCTCGTGGAGGCATGGGATAACGATACGCTCCATCCCGCCCGGCTCGGAGGCCGCGCATCGGTGCGTGCCTCGCTTCCGGGTGCTGAAACTGGAAAACAGGGGAAAAGAGGAATGGCGGAGAAAAGTGATATACAGCCGGGATAG
PROTEIN sequence
Length: 578
MLNFRADIEWVNGQPFSRRYGDIYFSREGGLAEKRHVFLDGNNLRERFASLGCRQTFTIGETGFGIGLNFLCARQLFEETANAGSSLDYFSVEKYPLDERELEQALAPWPEFRRYAVELIQRWRRRVPGWNRWSFANGRVRLTLVIDDALTALPEASASVDAWFLDGFAPSHNPELWTQPVCESIVSASRSGTTFSTYTCTGWVRRSLEKAGFQVDKAPGFGRKREMLRGCLPGAANPSSPPATAIVIGAGLAGCSVASALAARGVAVSLIEQAPRLAAGASGNSLGILHARLSAGMSPLQRFVLASYGYALALLDEKLPVDGIARAECGELQLAFSDDETKRIDKLAALDWPPHILQYVGPADASNLASLKLAHGGLWFPAGGWVVPASVCEVLAADPRITQRLGCSADSLAWKKDTDAGWHVAGQDQNGQSWEQAAQIVAVCTSYQVKNFEPLADFPLTPVRGQITALPVTPPSKNLRTIVSARAYLSPGVAGTHVAGATHGFNDVSLELRTCDHLENLHKLSEISPALVEAWDNDTLHPARLGGRASVRASLPGAETGKQGKRGMAEKSDIQPG*