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SCNpilot_cont_1000_p_scaffold_1638_8

Organism: SCNPILOT_CONT_300_BF_Actinomycetales_73_43

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 13 / 38
Location: comp(8574..8837)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, omega subunit; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 87.0
  • Bit_score: 153
  • Evalue 3.20e-35
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 87.0
  • Bit_score: 153
  • Evalue 1.40e-34
DNA-directed RNA polymerase subunit omega n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6C7_CELGA similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 87.0
  • Bit_score: 153
  • Evalue 1.00e-34

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Taxonomy

[Cellvibrio] gilvus → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 264
GTGTCCGGAACCGTCGCCCAGCCCACCGGCATCACCGACCCGCCGATCGACGACCTGCTCGAGAAGGCCGACTCCAAGTACGCCCTCGTGCTGTTCAGCGCGAAGCGGGCGCGCCAGATCAACGCCTACTACGCCCAGCTCAACGAGGGCCTCCTGGAGTACGTCGGGCCGCTCGTCGAGACGCGCCCGCAGGAGAAGCCGCTCTCGATCGCGATGCGCGAGATCGACCGCGGGCTGCTGACGATCGTCCCCGTCGAGGACTGA
PROTEIN sequence
Length: 88
VSGTVAQPTGITDPPIDDLLEKADSKYALVLFSAKRARQINAYYAQLNEGLLEYVGPLVETRPQEKPLSIAMREIDRGLLTIVPVED*