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SCNpilot_cont_1000_p_scaffold_56_214

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(232262..232828)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination/antitermination protein NusG n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUF8_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 187.0
  • Bit_score: 279
  • Evalue 2.00e-72
NusG antitermination factor; K02601 transcriptional antiterminator NusG similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 187.0
  • Bit_score: 279
  • Evalue 6.40e-73
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 187.0
  • Bit_score: 279
  • Evalue 2.90e-72

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGACAGAAGAAACCGTAACGAACCAGGAAACCAAGTGGTATGTGCTGCGTGTAGTAAGCGGCAAGGAGAAGAAGGTAAAGGAATACCTGGATAAAGAAGTGAAAATAAGCGGCTGGGAAAACTCTGTATTGCAGGTATTGTGCCCGGTTGAAAAAGTATTCAAAGTGCAGGCCGGTAAGAAGGTGCTGCGTGAAAAAACGCTTTTCCCCGGTTACCTGATGCTTGAAGCTAACGACGGTAAACTTACCGATGATATCATACATACCATCAAGAACATCACCGGTGTTATCCACTTCCTGGGTAAAGACCATCCTACCCCGCTGCGCAAAAGCGAAGTGAACAAGATGTTCGGTAAGATGGACGAAGTAAGCGAACAGGGTATAGGCTATGCAGAGCCATATATTGTGGGTGAAACGGTGAAGATCATCGACGGACCTTTCAACGACTTCAACGGTACGGTGGAAGAAGTGAATGAAGAGAAGAAGAAACTGAAAGTAGTGGTGAAGATATTTGGCCGTGCCACACCTGTGGAACTGAACTATATGCAGGTAGAGAAGATAGTGTAA
PROTEIN sequence
Length: 189
MTEETVTNQETKWYVLRVVSGKEKKVKEYLDKEVKISGWENSVLQVLCPVEKVFKVQAGKKVLREKTLFPGYLMLEANDGKLTDDIIHTIKNITGVIHFLGKDHPTPLRKSEVNKMFGKMDEVSEQGIGYAEPYIVGETVKIIDGPFNDFNGTVEEVNEEKKKLKVVVKIFGRATPVELNYMQVEKIV*