ggKbase home page

SCNpilot_cont_300_bf_scaffold_32192_3

Organism: SCNpilot_cont_300_bf_UNK

megabin RP 54 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: 1275..1634

Top 3 Functional Annotations

Value Algorithm Source
Type IV conjugative transfer system lipo family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X208_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 120.0
  • Bit_score: 168
  • Evalue 4.20e-39
TraV protein {ECO:0000313|EMBL:GAN14664.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 120.0
  • Bit_score: 166
  • Evalue 1.70e-38
conjugal transfer protein TraV similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 121.0
  • Bit_score: 120
  • Evalue 2.90e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
GTGAGCGGGCGTCGCCACGGCCGTCAGGTCGCTCTCGCCGCCGTGAGCCTCGCTGCTCTTGCCGCCCTCAATGGCTGCGCGACCCTTGGCACCAACGTGAAGGGGAGCTTCTCCTGCCAGGCGCCGGACGGTATCTGCGCGCCGTCATCGACGATAGACGATCGTGCGTTGGCGATGATCTCGGGCGATGCGGGCGATACGGTGATCCCGGCCGGCCCGTACCAAGCGCCCGCCCAGCAGCTTCGCGCGAAGCGGACGGCGATGACCGTGCCTGCGCCGATGGCCGACCGTAGTGCGGCCGCGGCGTCGCGGACACGCGAGAAGGTCCTTCGGGTGGTGTTTCAACCCTACATCGACGAT
PROTEIN sequence
Length: 120
VSGRRHGRQVALAAVSLAALAALNGCATLGTNVKGSFSCQAPDGICAPSSTIDDRALAMISGDAGDTVIPAGPYQAPAQQLRAKRTAMTVPAPMADRSAAAASRTREKVLRVVFQPYIDD