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SCNpilot_cont_300_bf_scaffold_219_98

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 122834..123769

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ55_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 311.0
  • Bit_score: 550
  • Evalue 1.00e-153
  • rbh
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 311.0
  • Bit_score: 550
  • Evalue 2.90e-154
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ACU02537.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 311.0
  • Bit_score: 550
  • Evalue 1.40e-153

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 936
ATGTATAAATCCATAAATCAGCAAATGAAAGCTCCGGCAAAAGTTTCATCAATAAGTGCATTGCATCAGTTTTTGGGATTGGCCAAGCCGTCCAATCCCCTGGTTAGTGTTTTTAATTTTGATGATGTAAAACTGAAACCCGAAACCATTTTAAGTGCAGTTACTACTGATTTTTATGTGGTTGCCTTAAAAAAGGACTGTGCAGGCGGTAAATGTAGGTACGGTCAGCAATATTATGATTTTGATGAGGGCATAATGTATTTTATTGCTCCGCATCAGGTATTGCAATTTGAAGATGTGCTTCTCAATGCAGTAAAGGGATTTGTTTTGGTGATGCATCCCGACTTACTTCACGGTTATCCCTTAGCTTCAGAAATTAAGAACTATGGCTATTTTTCCTACTCTGCCAATGAAGCACTGCACCTTTCTGAAAAAGAAGAGAAAGCCATAATGCACATCATAGAAAATATGGATAGGGAGATAGCAGACAATATGGATGGCTTTACACAGGACTTGCTCATATCCAATATGGATTTGTTGCTAAAGTATTGCGACCGTTTTTACAACCGTCAGTTTTTGACCAGGAAGAAAGCCAATACTGATTTGCTCACGAAGTTGGAAGCCTTTCTGGATGAGAATTTTAAAAGTGAAATACTGGCTGAAAAAGGCATTCCTACCGTTCAGTTTACGGCAAGCGTACTGCATTTAAGCCCCAATTATTTAAGCGATATGCTTCGGGTGCAAACCGGACAGACTACACAACAACACATTCAGAACAGAGTAATTGAAAAAGCAAAAGAATTATTATCTACAACATCAATGTCCGTATCGGAAATAGCTTATCAGTTGGGATTTGAGCATTCACAGTCTTTTCATCGTTTATTTAAAAACCGTACCTCTGTTTCTCCATTGGAGTTTAGGCAGTCTTTTAATTAA
PROTEIN sequence
Length: 312
MYKSINQQMKAPAKVSSISALHQFLGLAKPSNPLVSVFNFDDVKLKPETILSAVTTDFYVVALKKDCAGGKCRYGQQYYDFDEGIMYFIAPHQVLQFEDVLLNAVKGFVLVMHPDLLHGYPLASEIKNYGYFSYSANEALHLSEKEEKAIMHIIENMDREIADNMDGFTQDLLISNMDLLLKYCDRFYNRQFLTRKKANTDLLTKLEAFLDENFKSEILAEKGIPTVQFTASVLHLSPNYLSDMLRVQTGQTTQQHIQNRVIEKAKELLSTTSMSVSEIAYQLGFEHSQSFHRLFKNRTSVSPLEFRQSFN*